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BaseInfo

ncRNA ID	novel_zma_miR4074
Species	Zea mays
Class	miRNA
Genome position	Chr5:145962012-145962095 [-]
Reference genome	RefGen_v4
Source	SRR2287160
Length	24
Mature sequence(if miRNA)	61 - GUGGAUUGGUGUGUAUUGGGAUGG - 84
Stem-loop(if miRNA)	--         -  U        A   A    ---A    AUUU   GUGGAUUGG UG GUAUUGGG UGG UUGG    AUGG    U   ||||||||| || |||||||| ||| ||||    ||||    G   CACCUAACC AC CAUAACUC GCC AAUU    UAUC    A UA         C  -        A   A    AAGG    GUUC
Stem-loop sequence	GUGGAUUGGUGUGUAUUGGGAUGGAUUGGAAUGGAUUUUGACUUGCUAUGGAAUUAAACCGACUCAAUACCACCCAAUCCACAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008657627.2	ncRNA:24   GGUAGGGUUAUGUGUGGUUAGGUG   1   ||||||||||||||||||||*||| targets:750   CCAUCCCAAUACACACCAAUACAC   773 Target Full Sequence	1.5	PREDICTED: Zea mays cell wall / vacuolar inhibitor of fructosidase 2 (LOC103635072), mRNA	NA	coding protein	psRNATarget
XM_008674507.2	ncRNA:24   GGUAGGGUUAUGUGUGGUUAGGUG   1   ||||||||||||||||||||*||| targets:2688   CCAUCCCAAUACACACCAAUACAC   2711 Target Full Sequence	1.5	PREDICTED: Zea mays MADS transcription factor (MADS36), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020549676.1	ncRNA:24   GGUAGGGUUAUGUGUGGUUAGGUG   1   ||||||||||||||||||||*||| targets:2773   CCAUCCCAAUACACACCAAUACAC   2796 Target Full Sequence	1.5	PREDICTED: Zea mays MADS transcription factor (MADS36), transcript variant X3, mRNA	NA	coding protein	psRNATarget
EZ110342.1	ncRNA:24   GGUAGGGUUAUGUGUGGUUAGGUG   1   =||*=||||||||||||||||||| targets:7   UCACUCCAAUACACACCAAUCCAC   30 Target Full Sequence	0.0	TSA: Zea mays contig46002, mRNA sequence	NA	coding protein	psRNATarget
EZ077876.1	ncRNA:24   GGUAGGGUUAUGUGUGGUUAGGUG   1   *|||=|||||||||*||||||||| targets:68   ACAUUCCAAUACACUCCAAUCCAC   91 Target Full Sequence	1.5	TSA: Zea mays contig13515, mRNA sequence	NA	coding protein	psRNATarget
EZ094421.1	ncRNA:22   UAGGGUUA-UGUGUGGUUAGGUG   1   ||=|||||-|||||||||||||| targets:1   AUUCCAAUUACACACCAAUCCAC   23 Target Full Sequence	2.0	TSA: Zea mays contig30073, mRNA sequence	NA	coding protein	psRNATarget