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BaseInfo

ncRNA ID	novel_zma_miR4065
Species	Zea mays
Class	miRNA
Genome position	Chr5:209743887-209744012 [-]
Reference genome	RefGen_v4
Source	SRR2287160;SRR2287161
Length	24
Mature sequence(if miRNA)	103 - CAUGAUGUUGAUCCAAGGGGACGU - 126
Stem-loop(if miRNA)	--              AA GGGACGUGCAGAUGAGUGAGAGGGGGGAUUUUGAAAAAGUUUGAU   CAUGAUGUUGAUCC  G                                             U   ||||||||||||||  |   GUACUACAACUAGG  C                                             A GU              -- UACCUGCGCCCCCACACUUAUUAAAAUAUGAAUUGACGGGCGACG
Stem-loop sequence	CAUGAUGUUGAUCCAAGGGGACGUGCAGAUGAGUGAGAGGGGGGAUUUUGAAAAAGUUUGAUUAGCAGCGGGCAGUUAAGUAUAAAAUUAUUCACACCCCCGCGUCCAUCGGAUCAACAUCAUGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008676928.2	ncRNA:24   UGCAGGGGAACCUAGUUGUAGUAC   1   |||||||||||||||||||||||* targets:2933   ACGUCCCCUUGGAUCAACAUCAUA   2956 Target Full Sequence	1.0	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At3g09650, chloroplastic (LOC103651307), mRNA	NA	coding protein	psRNATarget
HI402920.1	ncRNA:24   UGCAGGGGAACCUAGUUGUAGUAC   1   ||--|||||||||||||||||||| targets:122   AC--CCCCUUGGAUCAACAUCAUG   143 Target Full Sequence	0.0	Sequence 1045 from Patent EP2074227	NA	coding protein	psRNATarget
JB163381.1	ncRNA:24   UGCAGGGGAACCUAGUUGUAGUAC   1   ||--|||||||||||||||||||| targets:122   AC--CCCCUUGGAUCAACAUCAUG   143 Target Full Sequence	0.0	Sequence 1045 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235050.1	ncRNA:24   UGCAGGGGAACCUAGUUGUAGUAC   1   ||--|||||||||||||||||||| targets:122   AC--CCCCUUGGAUCAACAUCAUG   143 Target Full Sequence	0.0	Sequence 1045 from Patent EP2985353	NA	coding protein	psRNATarget