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BaseInfo

ncRNA ID	novel_zma_miR4052
Species	Zea mays
Class	miRNA
Genome position	Chr4:130324498-130324585 [+]
Reference genome	RefGen_v4
Source	SRR2287160
Length	24
Mature sequence(if miRNA)	65 - CGAGGGAAUAUGAUGAGCGCGGAA - 88
Stem-loop(if miRNA)	--CA   ACG              AGU     AAAGGAACUCCUU     GUG   GUCAUAUUCCCUUG   GAGGG             C     |||   ||||||||||||||   |||||     CGC   UAGUAUAAGGGAGC   CUUAA             U AAGG   GAG              --C     UACUUUGAGUUCU
Stem-loop sequence	CAGUGACGGUCAUAUUCCCUUGAGUGAGGGAAAGGAACUCCUUCUUCUUGAGUUUCAUAAUUCCCGAGGGAAUAUGAUGAGCGCGGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020542269.1	ncRNA:24   AAGGCGCGAGUAGUAUAAGGGAGC   1   |||||||||||||||||||||||* targets:220   UUCCGCGCUCAUCAUAUUCCCUCA   243 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC109941395 (LOC109941395), mRNA	NA	coding protein	psRNATarget
XM_020552332.1	ncRNA:24   AAGGCGCGAGUAGUAUAAGGGAGC   1   ||||*|||||||||||||||||=* targets:226   UUCCACGCUCAUCAUAUUCCCUUA   249 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109945940 (LOC109945940), mRNA	NA	coding protein	psRNATarget
XM_020548988.1	ncRNA:24   AAGGCGCGAGUAGUAUAAGGGAGC   1   ||||*=|||||||||||||||||* targets:370   UUCCAUGCUCAUCAUAUUCCCUCA   393 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC109944283 (LOC109944283), mRNA	NA	coding protein	psRNATarget
NM_001176938.1	ncRNA:24   AAGGCGCGAGUAGUAUAAGGGAGC   1   ||||*=|||||*|||||||||||| targets:627   UUCCAUGCUCACCAUAUUCCCUCG   650 Target Full Sequence	2.5	Zea mays uncharacterized LOC100384396 (LOC100384396), mRNA	NA	coding protein	psRNATarget
BT070023.2	ncRNA:24   AAGGCGCGAGUAGUAUAAGGGAGC   1   ||||*=|||||*|||||||||||| targets:627   UUCCAUGCUCACCAUAUUCCCUCG   650 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0369D17 mRNA, complete cds	NA	coding protein	psRNATarget