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BaseInfo

ncRNA ID	novel_zma_miR4050
Species	Zea mays
Class	miRNA
Genome position	Chr4:116205640-116205709 [+]
Reference genome	RefGen_v4
Source	SRR2287160
Length	24
Mature sequence(if miRNA)	47 - GCAAGGGCGGACUGUCUGCGGCCU - 70
Stem-loop(if miRNA)	--    --          GG   G     --A     G   GCCG  GACGGUCCGC  CCU GUGCG   GGCAC G   ||||  ||||||||||  ||| |||||   |||||   CGGC  CUGUCAGGCG  GGA CGCGU   UCGUG U UC    GU          --   A     CCC     G
Stem-loop sequence	GCCGGACGGUCCGCGGCCUGGUGCGAGGCACGGUGGUGCUCCCUGCGCAAGGGCGGACUGUCUGCGGCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001196968.1	ncRNA:24   UCCGGCGUCUGUCAGGCGGGAACG   1   |||||||=||||||||||||*||| targets:1267   AGGCCGCGGACAGUCCGCCCCUGC   1290 Target Full Sequence	2.5	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
BT088349.1	ncRNA:24   UCCGGCGUCUGUCAGGCGGGAACG   1   |||||||=||||||||||||*||| targets:1267   AGGCCGCGGACAGUCCGCCCCUGC   1290 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020539115.1	ncRNA:24   UCCGGCGUCUGUCAGGCGGGAACG   1   |||||||=||||||||||||*||| targets:2710   AGGCCGCGGACAGUCCGCCCCUGC   2733 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA	NA	coding protein	psRNATarget