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BaseInfo

ncRNA ID osa-miRf10002-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AGGAUGCCACAUUCUCAUCC - NA
Stem-loop(if miRNA)       C      C      A             CUAGCCA  G
GUUUCA CUAGGA GAGGAU UGGCAUCCUAUUA       UC C
|||||| |||||| |||||| |||||||||||||       ||
CAAGGU GAUCCU CUCUUA ACCGUAGGAUAAU       AG A
      A      A      C             ---UAAA  C
Stem-loop sequence GUUUCACCUAGGACGAGGAUAUGGCAUCCUAUUACUAGCCAUCGCACGAAAAUUAAUAGGAUGCCACAUUCUCAUCCUAGAUGGAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK073475.1
ncRNA:20   CCUACUCUUACACCGUAGGA   1
  |||*|=||||||||||||||
targets:105   GGAGGGGAAUGUGGCAUCCU   124

2.0 Oryza sativa Japonica Group cDNA clone:J033044E04, full insert sequence NA coding protein psRNATarget
XM_015759188.1
ncRNA:20   CCUACUCUUACACCGUAGGA   1
  |||*|=||||||||||||||
targets:296   GGAGGGGAAUGUGGCAUCCU   315

2.0 PREDICTED: Oryza sativa Japonica Group lysine-specific demethylase JMJ706 (LOC4349499), transcript variant X1, mRNA lysine-specific demethylase JMJ706(LOC4349499) coding protein psRNATarget