ncRNA ID | novel_zma_miR4045 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:189521930-189522066 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGAUCUUUGCCGAGUGUCAGGGC - 24 |
Stem-loop(if miRNA) |
CUAAAA             ------------G      -   -   UAACACUCGGCAAAGAAGGCUCGGCAAA       ACACUCGGCAAAG             CUUUGC CGA GUG                            C       |||||||||||||             |||||| ||| |||                            A       UGUGAGCCGUUUC             CGGGCU UUU UCA                            G CGGGAC             UAGAAACGGCUCA      U   U   UGAGCCGUUUCUUCAGAAACGGCUACAU |
Stem-loop sequence | CUAAAAACACUCGGCAAAGGCUUUGCCGAGUGUAACACUCGGCAAAGAAGGCUCGGCAAACAGUACAUCGGCAAAGACUUCUUUGCCGAGUACUUUUUUUCGGGCACUCGGCAAAGAUCUUUGCCGAGUGUCAGGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008671736.2 |
|
2.5 | PREDICTED: Zea mays probable serine/threonine-protein kinase PBL28 (LOC103647166), mRNA | NA | coding protein | psRNATarget |