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BaseInfo

ncRNA ID novel_zma_miR4045
Species Zea mays
Class miRNA
Genome position Chr1:189521930-189522066 [-]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 1 - AAGAUCUUUGCCGAGUGUCAGGGC - 24
Stem-loop(if miRNA) CUAAAA             ------------G      -   -   UAACACUCGGCAAAGAAGGCUCGGCAAA
      ACACUCGGCAAAG             CUUUGC CGA GUG                            C
      |||||||||||||             |||||| ||| |||                            A
      UGUGAGCCGUUUC             CGGGCU UUU UCA                            G
CGGGAC             UAGAAACGGCUCA      U   U   UGAGCCGUUUCUUCAGAAACGGCUACAU
Stem-loop sequence CUAAAAACACUCGGCAAAGGCUUUGCCGAGUGUAACACUCGGCAAAGAAGGCUCGGCAAACAGUACAUCGGCAAAGACUUCUUUGCCGAGUACUUUUUUUCGGGCACUCGGCAAAGAUCUUUGCCGAGUGUCAGGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008671736.2
ncRNA:24   CGG------GACUGUGAGCCGUUUCUAGAA   1
  |||------=|||||||||||||||||=|*
targets:158   GCCGAGUGUUUGACACUCGGCAAAGAUUUA   187

2.5 PREDICTED: Zea mays probable serine/threonine-protein kinase PBL28 (LOC103647166), mRNA NA coding protein psRNATarget