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BaseInfo

ncRNA ID	novel_zma_miR4032
Species	Zea mays
Class	miRNA
Genome position	Chr7:166597657-166597730 [+]
Reference genome	RefGen_v4
Source	SRR1583941;SRR1583942
Length	25
Mature sequence(if miRNA)	1 - AAUCCCCUUCUAUAUAAAUUUGUAU - 25
Stem-loop(if miRNA)	--     C                        A   U   AAUCC CUUCUAUAUAAAUUUGUAUAGGAG GAA U   ||||| |||||||||||||||||||||||| |||   UUAGG GAAGAUAUGUUUAAACAUAUUUUC CUU A AU     A                        C   A
Stem-loop sequence	AAUCCCCUUCUAUAUAAAUUUGUAUAGGAGAGAAUUAAUUCCCUUUUAUACAAAUUUGUAUAGAAGAGGAUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT042029.1	ncRNA:25   UAUGUUUAAAUAUAUCUUCCCCUAA   1   ||||||||||||||||=|||||||* targets:229   AUACAAAUUUAUAUAGGAGGGGAUA   253 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0114D19 mRNA, complete cds	NA	coding protein	psRNATarget
EU941172.1	ncRNA:25   UAUGUUUAAAUAUAUCUUCCCCUAA   1   |||=||||||=|||||=|||||||| targets:91   AUAUAAAUUUGUAUAGGAGGGGAUU   115 Target Full Sequence	2.5	Zea mays clone 1360935 mRNA sequence	NA	coding protein	psRNATarget
LQ239233.1	ncRNA:25   UAUGUUUAAAUAUAUCUUCCCCUAA   1   ||||||||||||||||||||*|||| targets:29   AUACAAAUUUAUAUAGAAGGAGAUU   53 Target Full Sequence	1.5	Sequence 5228 from Patent EP2985353	NA	coding protein	psRNATarget
JB167564.1	ncRNA:25   UAUGUUUAAAUAUAUCUUCCCCUAA   1   ||||||||||||||||||||*|||| targets:29   AUACAAAUUUAUAUAGAAGGAGAUU   53 Target Full Sequence	1.5	Sequence 5228 from Patent EP2559767	NA	coding protein	psRNATarget
HI407103.1	ncRNA:25   UAUGUUUAAAUAUAUCUUCCCCUAA   1   ||||||||||||||||||||*|||| targets:29   AUACAAAUUUAUAUAGAAGGAGAUU   53 Target Full Sequence	1.5	Sequence 5228 from Patent EP2074227	NA	coding protein	psRNATarget
XM_020552749.1	ncRNA:25   UAUGUUUAAAUAUAUCUUCCCCUAA   1   ||*=||||||=|||||||||||||| targets:3245   AUUUAAAUUUGUAUAGAAGGGGAUU   3269 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103654236 (LOC103654236), mRNA	NA	coding protein	psRNATarget
EZ093244.1	ncRNA:25   UAUGUUUAAAUAUAUCUUCCCCUAA   1   ||*=||||||=|||||||||||||| targets:49   AUUUAAAUUUGUAUAGAAGGGGAUU   73 Target Full Sequence	1.0	TSA: Zea mays contig28894, mRNA sequence	NA	coding protein	psRNATarget