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BaseInfo

ncRNA ID novel_zma_miR4031
Species Zea mays
Class miRNA
Genome position Chr3:39613735-39613836 [-]
Reference genome RefGen_v4
Source SRR2287159;SRR2287161;SRR2287163;SRR2287164
Length 23
Mature sequence(if miRNA) 80 - AUAGGAUGUUUCCACUGACGGUU - 102
Stem-loop(if miRNA) --                 A         UAAGA           A    U
  AUAGGAUGUUUCCACUG CGGUUGUGU     UAACCGCCAGU GAAA C
  ||||||||||||||||| |||||||||     ||||||||||| |||| A
  UAUCCUACAAAGGUGAC GCCAACACA     GUUGGCGGUCA CUUU A
UU                 C         UUGUG           -    U
Stem-loop sequence AUAGGAUGUUUCCACUGACGGUUGUGUUAAGAUAACCGCCAGUAGAAAUCAAUUUUCACUGGCGGUUGGUGUUACACAACCGCCAGUGGAAACAUCCUAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ101180.1
ncRNA:23   UUGGCAGUCACCUUUGUAGGAUA   1
  |||||*|||||||||=|||||||
targets:81   AACCGCCAGUGGAAAUAUCCUAU   103

2.5 TSA: Zea mays contig36836, mRNA sequence NA coding protein psRNATarget