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BaseInfo

ncRNA ID ath-miRf10048-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - AUGGGAUCGAUCGAUCCCAGG - NA
Stem-loop(if miRNA)     -                 ----  A   --GAC   UCGAUCCAGGUC
GCUC GGGAUCGAUCGAUCCCA    GG GGG     CGA            G
|||| |||||||||||||||||    || |||     |||
CGGG CCCUAGCUAGCUAGGGU    CC CCC     UGG            U
    A                 AGGA  G   AGACU   AAGUAGACCGUC
Stem-loop sequence GCUCGGGAUCGAUCGAUCCCAGGAGGGGACCGAUCGAUCCAGGUCGUCUGCCAGAUGAAGGUUCAGACCCGCCAGGAUGGGAUCGAUCGAUCCCAGGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_113998.2
ncRNA:21   GGACCCUAGCUAGCUAGGGUA   1
  **||||||||||||||||||*
targets:312   GAUGGGAUCGAUCGAUCCCAA   332

1.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT3G31350) coding protein psRNATarget
NM_113998.2
ncRNA:21   GGACCCUAGCUAGCUAGGGUA   1
  |*|*|||||||||||||||||
targets:240   CAUUGGAUCGAUCGAUCCCAU   260

1.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT3G31350) coding protein psRNATarget
NM_113998.2
ncRNA:21   GGA-CCCUAGCUAGCUAGGGUA   1
  *||-||||||||||||||||||
targets:363   GCUCGGGAUCGAUCGAUCCCAU   384

2.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT3G31350) coding protein psRNATarget
NM_001339159.1
ncRNA:21   GGACCCUAGCUAGCUAGGGUA   1
  ***|||||||||||||||||*
targets:171   AACGGGAUCGAUCGAUCCCAC   191

2.0 Arabidopsis thaliana hypothetical protein mRNA hypothetical protein(AT3G44580) coding protein psRNATarget