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BaseInfo

ncRNA ID	novel_zma_miR4026
Species	Zea mays
Class	miRNA
Genome position	Chr3:33198892-33199011 [+]
Reference genome	RefGen_v4
Source	SRR2287159
Length	24
Mature sequence(if miRNA)	1 - GGGUACUCUAGUAUUGAAGUGGUU - 24
Stem-loop(if miRNA)	--          ----------------  AUUGAAGUGGUUUUGAAGGAUCGAAGAGUGUAUAAAUC   GGGUACUCUA                GU                                      C   ||||||||||                ||   CCCAUGAGAU                CU                                      C AA          AAUUAUUUUCCCUAAU  CACCUAAGUCUACAUAACACCCUCAAAAACUAGAUAAU
Stem-loop sequence	GGGUACUCUAGUAUUGAAGUGGUUUUGAAGGAUCGAAGAGUGUAUAAAUCCCUAAUAGAUCAAAAACUCCCACAAUACAUCUGAAUCCACUCUAAUCCCUUUUAUUAAUAGAGUACCCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020540884.1	ncRNA:24   UUGGUGAAGUUAUGAUCUCAUGGG   1   |||||||||||||||||||||||| targets:3943   AACCACUUCAAUACUAGAGUACCC   3966 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized mitochondrial protein AtMg00810-like (LOC109940748), mRNA	NA	coding protein	psRNATarget
EZ074421.1	ncRNA:24   UUGGUGAAGUUAUGAUCUCAUGGG   1   ||||||||||||||||*||||||| targets:48   AACCACUUCAAUACUAAAGUACCC   71 Target Full Sequence	1.5	TSA: Zea mays contig10058, mRNA sequence	NA	coding protein	psRNATarget
XM_008666548.1	ncRNA:24   UUGGUGAAGUUAUGAUCUCAUGGG   1   ||||||||||*||||||||||||| targets:247   AACCACUUCAUUACUAGAGUACCC   270 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103643386 (LOC103643386), mRNA	NA	coding protein	psRNATarget
EZ056559.1	ncRNA:24   UUGGUG-AAGUUAUGAUCUCAUGGG   1   ||=|=|-||||*||||||||||||| targets:9   AAUCGCAUUCAUUACUAGAGUACCC   33 Target Full Sequence	3.0	TSA: Zea mays contig57681, mRNA sequence	NA	coding protein	psRNATarget
LQ235526.1	ncRNA:24   UUGG-UGAAGUUAUGAUCUCAUGGG   1   ||==-|**||||||||||||||||| targets:101   AAUUGAGGUCAAUACUAGAGUACCC   125 Target Full Sequence	2.0	Sequence 1521 from Patent EP2985353	NA	coding protein	psRNATarget
HI403396.1	ncRNA:24   UUGG-UGAAGUUAUGAUCUCAUGGG   1   ||==-|**||||||||||||||||| targets:101   AAUUGAGGUCAAUACUAGAGUACCC   125 Target Full Sequence	2.0	Sequence 1521 from Patent EP2074227	NA	coding protein	psRNATarget
JB163857.1	ncRNA:24   UUGG-UGAAGUUAUGAUCUCAUGGG   1   ||==-|**||||||||||||||||| targets:101   AAUUGAGGUCAAUACUAGAGUACCC   125 Target Full Sequence	2.0	Sequence 1521 from Patent EP2559767	NA	coding protein	psRNATarget