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BaseInfo

ncRNA ID	novel_zma_miR4025
Species	Zea mays
Class	miRNA
Genome position	Chr1:212473971-212474040 [-]
Reference genome	RefGen_v4
Source	SRR1583944
Length	24
Mature sequence(if miRNA)	47 - AGGACUUAUAUAUAUAUAUAUAUA - 70
Stem-loop(if miRNA)	--AG  CU                          U     GA  UAUAUAUAUAUAUAUAUAUAUAUAUA A     ||  ||||||||||||||||||||||||||     CU  AUAUAUAUAUAUAUAUAUAUAUAUAU U AAAA  AU                          A
Stem-loop sequence	AGGACUUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUCAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT016405.1	ncRNA:24   AUAUAUAUAUAUAUAUAUUCAGGA   1   ||||||||||||||||||=||||* targets:1110   UAUAUAUAUAUAUAUAUAGGUCCC   1133 Target Full Sequence	2.5	Zea mays clone Contig238 mRNA sequence	NA	coding protein	psRNATarget
XM_008645673.2	ncRNA:24   AUAUAUAUAUAUAUAUAUUCAGGA   1   |=|||||||||=|||||||||||* targets:2437   UGUAUAUAUAUGUAUAUAAGUCCA   2460 Target Full Sequence	2.5	PREDICTED: Zea mays RING/U-box superfamily protein (LOC100304255), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008647623.2	ncRNA:24   AUAUAUAUAUAUAUAUAUUCAGGA   1   *|||||||||||||||||*||||* targets:1019   GAUAUAUAUAUAUAUAUAUGUCCA   1042 Target Full Sequence	2.5	PREDICTED: Zea mays putative protein TPRXL (LOC103627316), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008647622.2	ncRNA:24   AUAUAUAUAUAUAUAUAUUCAGGA   1   *|||||||||||||||||*||||* targets:860   GAUAUAUAUAUAUAUAUAUGUCCA   883 Target Full Sequence	2.5	PREDICTED: Zea mays putative protein TPRXL (LOC103627316), transcript variant X1, mRNA	NA	coding protein	psRNATarget