ncRNA ID | osa-miR1437 |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - UCCGGCGCCGCACUAGGCACUG - NA |
Stem-loop(if miRNA) |
     C                              A                   A   GUGAGGUG      AC      CA  GC      A   U GCGCG GGGGAGGGAGGGAACGGUGCCUAGUGCGGC CCGGAGCUCGCCAGCACGC GGA        AGGAGG  GGCGGC  GG  GCGGAG GCU G ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||        ||||||  ||||||  ||  |||||| ||| CGCGC CCCCUCCCUCCUUUGUCACGGAUCACGCCG GGCCUCGAGCGGUCGUGCG CCU        UCCUCC  UCGCCG  CC  CGCCUC CGG C      A                              C                   -   --------      -A      --  AC      G   C |
Stem-loop sequence | GCGCGCGGGGAGGGAGGGAACGGUGCCUAGUGCGGCACCGGAGCUCGCCAGCACGCAGGAGUGAGGUGAGGAGGACGGCGGCCAGGGCGCGGAGAGCUUGCCGGCGCUCCGCCACCGCCGCUACCUCCUUCCGCGUGCUGGCGAGCUCCGGCGCCGCACUAGGCACUGUUUCCUCCCUCCCCACGCGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015784009.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group probable disease resistance protein At5g45440 (LOC107275438), mRNA | probable disease resistance protein At5g45440(LOC107275438) | coding protein | psRNATarget |