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BaseInfo

ncRNA ID novel_zma_miR4006
Species Zea mays
Class miRNA
Genome position Chr2:6286587-6286654 [-]
Reference genome RefGen_v4
Source SRR2287159;SRR2287161;SRR2287165
Length 21
Mature sequence(if miRNA) 48 - GUUCCCUACAAGCACUUCACG - 68
Stem-loop(if miRNA) --       A               ACCU      A
  GUUCCCU CAAGCACUUCACGAU    UGGCUU A
  ||||||| |||||||||||||||    |||||| U
  CAAGGGG GUUUGUGAAGUGUUG    ACCGGA A
CU       -               ----      A
Stem-loop sequence GUUCCCUACAAGCACUUCACGAUACCUUGGCUUAAUAAAGGCCAGUUGUGAAGUGUUUGGGGGAACUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020552243.1
ncRNA:21   GCACUUCACGAACAUCCCUUG   1
  *||||||||||||*||||||=
targets:319   GGUGAAGUGCUUGGAGGGAAU   339

2.5 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC109945872), mRNA NA coding protein psRNATarget