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BaseInfo

ncRNA ID novel_zma_miR4003
Species Zea mays
Class miRNA
Genome position Chr2:13923514-13923603 [-]
Reference genome RefGen_v4
Source SRR2287159
Length 24
Mature sequence(if miRNA) 1 - AAAAAGAAACGGAGGGAGUAGUAU - 24
Stem-loop(if miRNA) --C                                         A
   CUACUCCCUCCGUUUCUUUUUAUUUGUCGCUGGAUAGUGUA A
   |||||||||||||||||||||||||||||||||||||||||
   GAUGAGGGAGGCAAAGAAAAAUAAACAGCGACCUAUCACGU A
UAU                                         U
Stem-loop sequence CCUACUCCCUCCGUUUCUUUUUAUUUGUCGCUGGAUAGUGUAAAAUUGCACUAUCCAGCGACAAAUAAAAAGAAACGGAGGGAGUAGUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020542418.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  ||||||||||||||||||||||||
targets:1973   AUACUACUCCCUCCGUUUCUUUUU   1996

0.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008658752.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  ||||||||||||||||||||||||
targets:2040   AUACUACUCCCUCCGUUUCUUUUU   2063

0.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008671993.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||=||||||||||||||||||||
targets:1162   AUAUUACUCCCUCCGUUUCUUUUU   1185

0.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008671992.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||=||||||||||||||||||||
targets:1268   AUAUUACUCCCUCCGUUUCUUUUU   1291

0.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
LQ240700.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  |||||||||||||||||||||||
targets:1   UACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6695 from Patent EP2985353 NA coding protein psRNATarget
HI408570.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  |||||||||||||||||||||||
targets:1   UACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6695 from Patent EP2074227 NA coding protein psRNATarget
JB169031.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  |||||||||||||||||||||||
targets:1   UACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6695 from Patent EP2559767 NA coding protein psRNATarget
BT062074.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:1133   CUACUACUCCCUCCGUUUCUUUUU   1156

0.0 Zea mays full-length cDNA clone ZM_BFb0212O02 mRNA, complete cds NA coding protein psRNATarget
XM_008682276.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:1216   CUACUACUCCCUCCGUUUCUUUUU   1239

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X2, mRNA NA coding protein psRNATarget
EU973774.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:1231   CUACUACUCCCUCCGUUUCUUUUU   1254

0.0 Zea mays clone 410704 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682289.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:1245   CUACUACUCCCUCCGUUUCUUUUU   1268

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X6, mRNA NA coding protein psRNATarget
NM_001158647.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:1297   CUACUACUCCCUCCGUUUCUUUUU   1320

0.0 Zea mays F-box domain containing protein (LOC100285757), mRNA NA coding protein psRNATarget
EU973763.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:1299   CUACUACUCCCUCCGUUUCUUUUU   1322

0.0 Zea mays clone 409560 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682282.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:1405   CUACUACUCCCUCCGUUUCUUUUU   1428

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008677073.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:1523   CUACUACUCCCUCCGUUUCUUUUU   1546

0.0 PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA NA coding protein psRNATarget
XM_020553332.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:1994   CUACUACUCCCUCCGUUUCUUUUU   2017

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020553342.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:2025   CUACUACUCCCUCCGUUUCUUUUU   2048

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020553327.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:2107   CUACUACUCCCUCCGUUUCUUUUU   2130

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020553339.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *|||||||||||||||||||||||
targets:2138   CUACUACUCCCUCCGUUUCUUUUU   2161

0.0 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X5, mRNA NA coding protein psRNATarget
JB163862.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  =||=||||||||||||||||||||
targets:7   GUAUUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1526 from Patent EP2559767 NA coding protein psRNATarget
LQ235531.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  =||=||||||||||||||||||||
targets:7   GUAUUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1526 from Patent EP2985353 NA coding protein psRNATarget
HI403401.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  =||=||||||||||||||||||||
targets:7   GUAUUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1526 from Patent EP2074227 NA coding protein psRNATarget
XM_020537567.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *||=||||||||||||||||||||
targets:1448   UUAUUACUCCCUCCGUUUCUUUUU   1471

0.0 PREDICTED: Zea mays MADS2 (zmm2), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546615.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *||=||||||||||||||||||||
targets:2792   CUAUUACUCCCUCCGUUUCUUUUU   2815

0.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *||=||||||||||||||||||||
targets:2809   CUAUUACUCCCUCCGUUUCUUUUU   2832

0.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *||=||||||||||||||||||||
targets:2915   CUAUUACUCCCUCCGUUUCUUUUU   2938

0.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546613.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *||=||||||||||||||||||||
targets:3694   CUAUUACUCCCUCCGUUUCUUUUU   3717

0.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
EZ058532.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  =|=||||||||||=||||||||||
targets:266   GUGCUACUCCCUCUGUUUCUUUUU   289

1.5 TSA: Zea mays contig59654, mRNA sequence NA coding protein psRNATarget
BT060817.2
ncRNA:24   UAUG---AUGAGGGAGGCAAAGAAAAA   1
  ||||---||||||||||||||||||||
targets:223   AUACCAAUACUCCCUCCGUUUCUUUUU   249

0.0 Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds NA coding protein psRNATarget
BT065083.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||||*||||||||||||||||||
targets:202   AUACUCCUCCCUCCGUUUCUUUUU   225

1.0 Zea mays full-length cDNA clone ZM_BFb0081B22 mRNA, complete cds NA coding protein psRNATarget
HI409615.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  *||||||||||||||||||||||
targets:1   AACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7740 from Patent EP2074227 NA coding protein psRNATarget
JB170076.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  *||||||||||||||||||||||
targets:1   AACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7740 from Patent EP2559767 NA coding protein psRNATarget
LQ241745.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  *||||||||||||||||||||||
targets:1   AACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7740 from Patent EP2985353 NA coding protein psRNATarget
HI409616.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  *||||||||||||||||||||||
targets:1   AACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7741 from Patent EP2074227 NA coding protein psRNATarget
LQ241746.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  *||||||||||||||||||||||
targets:1   AACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7741 from Patent EP2985353 NA coding protein psRNATarget
JB170077.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  *||||||||||||||||||||||
targets:1   AACUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7741 from Patent EP2559767 NA coding protein psRNATarget
LQ235424.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  =*||||||||||||||||||||||
targets:7   GAACUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1419 from Patent EP2985353 NA coding protein psRNATarget
HI403294.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  =*||||||||||||||||||||||
targets:7   GAACUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1419 from Patent EP2074227 NA coding protein psRNATarget
JB163755.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  =*||||||||||||||||||||||
targets:7   GAACUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1419 from Patent EP2559767 NA coding protein psRNATarget
EU953599.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  **||||||||||||||||||||||
targets:1221   CCACUACUCCCUCCGUUUCUUUUU   1244

0.0 Zea mays clone 1437867 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_020546173.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  |||=-||||||||||||||||||||
targets:1458   AUAUAUACUCCCUCCGUUUCUUUUU   1482

0.0 PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA NA coding protein psRNATarget
JB170160.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  |==||||||||||||||||||||
targets:1   UGUUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7824 from Patent EP2559767 NA coding protein psRNATarget
HI409699.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  |==||||||||||||||||||||
targets:1   UGUUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7824 from Patent EP2074227 NA coding protein psRNATarget
LQ241829.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  |==||||||||||||||||||||
targets:1   UGUUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7824 from Patent EP2985353 NA coding protein psRNATarget
HI403287.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  ||=*||||||||||||||||||||
targets:7   AUGAUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1412 from Patent EP2074227 NA coding protein psRNATarget
JB163748.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  ||=*||||||||||||||||||||
targets:7   AUGAUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1412 from Patent EP2559767 NA coding protein psRNATarget
LQ235417.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  ||=*||||||||||||||||||||
targets:7   AUGAUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1412 from Patent EP2985353 NA coding protein psRNATarget
XM_008664463.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||*|||||||||=||||||||||
targets:89   AUAGUACUCCCUCUGUUUCUUUUU   112

1.5 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA NA coding protein psRNATarget
NM_001152046.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||=||||===|||||||||||||
targets:824   AUAUUACUUUUUCCGUUUCUUUUU   847

3.0 Zea mays uncharacterized LOC100278927 (LOC100278927), mRNA NA coding protein psRNATarget
EU976025.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||=||||===|||||||||||||
targets:824   AUAUUACUUUUUCCGUUUCUUUUU   847

3.0 Zea mays clone 508899 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
XM_008664460.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||*|||||||||=||||||||||
targets:109   AUAGUACUCCCUCUGUUUCUUUUU   132

1.5 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546695.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||-||||||||||||||||||||
targets:2202   AUA-UACUCCCUCCGUUUCUUUUU   2224

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X13, mRNA NA coding protein psRNATarget
XM_008666445.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||-||||||||||||||||||||
targets:2202   AUA-UACUCCCUCCGUUUCUUUUU   2224

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X14, mRNA NA coding protein psRNATarget
XM_020546694.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||-||||||||||||||||||||
targets:2202   AUA-UACUCCCUCCGUUUCUUUUU   2224

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X12, mRNA NA coding protein psRNATarget
XM_020546685.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||-||||||||||||||||||||
targets:2223   AUA-UACUCCCUCCGUUUCUUUUU   2245

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546687.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||-||||||||||||||||||||
targets:2223   AUA-UACUCCCUCCGUUUCUUUUU   2245

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020546686.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||-||||||||||||||||||||
targets:2223   AUA-UACUCCCUCCGUUUCUUUUU   2245

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546691.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||-||||||||||||||||||||
targets:2202   AUA-UACUCCCUCCGUUUCUUUUU   2224

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X9, mRNA NA coding protein psRNATarget
XM_020546689.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||-||||||||||||||||||||
targets:2161   AUA-UACUCCCUCCGUUUCUUUUU   2183

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020546683.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||-||||||||||||||||||||
targets:2216   AUA-UACUCCCUCCGUUUCUUUUU   2238

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546684.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||-||||||||||||||||||||
targets:2241   AUA-UACUCCCUCCGUUUCUUUUU   2263

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546692.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||-||||||||||||||||||||
targets:2202   AUA-UACUCCCUCCGUUUCUUUUU   2224

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X10, mRNA NA coding protein psRNATarget
XM_020546693.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||-||||||||||||||||||||
targets:2140   AUA-UACUCCCUCCGUUUCUUUUU   2162

0.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X11, mRNA NA coding protein psRNATarget
LQ240748.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  *|=||||||||||||||||||||
targets:1   AAUUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6743 from Patent EP2985353 NA coding protein psRNATarget
HI408618.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  *|=||||||||||||||||||||
targets:1   AAUUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6743 from Patent EP2074227 NA coding protein psRNATarget
JB169079.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  *|=||||||||||||||||||||
targets:1   AAUUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6743 from Patent EP2559767 NA coding protein psRNATarget
NM_001328133.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  =|||-||||||||||||||=|||||
targets:759   GUACGUACUCCCUCCGUUUUUUUUU   783

1.5 Zea mays Methionyl-tRNA synthetase (LOC100384454), mRNA NA coding protein psRNATarget
BT070166.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  =|||-||||||||||||||=|||||
targets:759   GUACGUACUCCCUCCGUUUUUUUUU   783

1.5 Zea mays full-length cDNA clone ZM_BFc0141C23 mRNA, complete cds NA coding protein psRNATarget
LQ235409.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *||*||||||||||||||||||||
targets:7   UUAGUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1404 from Patent EP2985353 NA coding protein psRNATarget
HI403279.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *||*||||||||||||||||||||
targets:7   UUAGUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1404 from Patent EP2074227 NA coding protein psRNATarget
JB163740.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *||*||||||||||||||||||||
targets:7   UUAGUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1404 from Patent EP2559767 NA coding protein psRNATarget
EU965844.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *||*||||||||||||||||||||
targets:1284   CUAAUACUCCCUCCGUUUCUUUUU   1307

0.0 Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds NA coding protein psRNATarget
NM_001156655.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *||*||||||||||||||||||||
targets:1284   CUAAUACUCCCUCCGUUUCUUUUU   1307

0.0 Zea mays wax synthase (LOC100283756), mRNA NA coding protein psRNATarget
XM_008647346.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *||*||||||||||||||||||||
targets:137   UUAAUACUCCCUCCGUUUCUUUUU   160

0.0 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
LQ242326.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  ||=-||||||||||||||||||||
targets:1   AUG-UACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 8321 from Patent EP2985353 NA coding protein psRNATarget
LQ240840.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  ||=-||||||||||||||||||||
targets:1   AUG-UACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6835 from Patent EP2985353 NA coding protein psRNATarget
JB170657.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  ||=-||||||||||||||||||||
targets:1   AUG-UACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 8321 from Patent EP2559767 NA coding protein psRNATarget
HI410196.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  ||=-||||||||||||||||||||
targets:1   AUG-UACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 8321 from Patent EP2074227 NA coding protein psRNATarget
HI408710.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  ||=-||||||||||||||||||||
targets:1   AUG-UACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6835 from Patent EP2074227 NA coding protein psRNATarget
JB169171.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  ||=-||||||||||||||||||||
targets:1   AUG-UACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 6835 from Patent EP2559767 NA coding protein psRNATarget
XM_008651544.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||-||||=|||||||||||||||
targets:1352   AUA-UACUUCCUCCGUUUCUUUUU   1374

1.0 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
EU970288.1
ncRNA:24   UAUG---AUGAGGGAGGCAAAGAAAAA   1
  ||=|---||||||||=|||||||||||
targets:1324   AUGCAUGUACUCCCUUCGUUUCUUUUU   1350

1.5 Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds NA coding protein psRNATarget
BT054612.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  =||*||||||=|||||||||||||
targets:1360   GUAGUACUCCUUCCGUUUCUUUUU   1383

1.0 Zea mays full-length cDNA clone ZM_BFc0190P19 mRNA, complete cds NA coding protein psRNATarget
XM_008675770.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  ||==|||||*||||||||||||||
targets:1804   AUGUUACUCACUCCGUUUCUUUUU   1827

1.0 PREDICTED: Zea mays pectinesterase-like (LOC103650113), mRNA NA coding protein psRNATarget
EU957018.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||-|||||||||=||||||||||
targets:1997   AUA-UACUCCCUCUGUUUCUUUUU   2019

1.5 Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds NA coding protein psRNATarget
XM_008651543.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||-||||=|||||||||||||||
targets:2493   AUA-UACUUCCUCCGUUUCUUUUU   2515

1.0 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget
LQ237990.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  **|=|||||=||||||||||||||
targets:1   UAAUUACUCUCUCCGUUUCUUUUU   24

1.0 Sequence 3985 from Patent EP2985353 NA coding protein psRNATarget
JB166321.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  **|=|||||=||||||||||||||
targets:1   UAAUUACUCUCUCCGUUUCUUUUU   24

1.0 Sequence 3985 from Patent EP2559767 NA coding protein psRNATarget
HI405860.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  **|=|||||=||||||||||||||
targets:1   UAAUUACUCUCUCCGUUUCUUUUU   24

1.0 Sequence 3985 from Patent EP2074227 NA coding protein psRNATarget
HI403399.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  ||*|-||||||||||||||||||||
targets:6   AUUCAUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1524 from Patent EP2074227 NA coding protein psRNATarget
JB163860.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  ||*|-||||||||||||||||||||
targets:6   AUUCAUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1524 from Patent EP2559767 NA coding protein psRNATarget
LQ235529.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  ||*|-||||||||||||||||||||
targets:6   AUUCAUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1524 from Patent EP2985353 NA coding protein psRNATarget
LQ235499.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *||-||||||||||||||||||||
targets:8   UUA-UACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1494 from Patent EP2985353 NA coding protein psRNATarget
HI403369.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *||-||||||||||||||||||||
targets:8   UUA-UACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1494 from Patent EP2074227 NA coding protein psRNATarget
JB163830.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *||-||||||||||||||||||||
targets:8   UUA-UACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1494 from Patent EP2559767 NA coding protein psRNATarget
EU973473.1
ncRNA:24   UAU--GA---UGAGGGAGGCAAAGAAAAA   1
  |||--||---|||||||||||||||||||
targets:640   AUAAACUUGUACUCCCUCCGUUUCUUUUU   668

3.0 Zea mays clone 399411 mRNA sequence NA coding protein psRNATarget
EZ061772.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *||-||||||||||||||||||||
targets:181   UUA-UACUCCCUCCGUUUCUUUUU   203

0.0 TSA: Zea mays contig62894, mRNA sequence NA coding protein psRNATarget
BT024153.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  **||-||||||||||||||||||||
targets:185   UCACGUACUCCCUCCGUUUCUUUUU   209

0.0 Zea mays clone EL01N0438E01 mRNA sequence NA coding protein psRNATarget
XM_008669400.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *||-||||||||||||||||||||
targets:1597   UUA-UACUCCCUCCGUUUCUUUUU   1619

0.0 PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020544250.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  =*||-||||||||||||||||||||
targets:2430   GGACAUACUCCCUCCGUUUCUUUUU   2454

0.0 PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA NA coding protein psRNATarget
JB170476.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  ||=-|||||||||=||||||||||
targets:1   AUG-UACUCCCUCUGUUUCUUUUU   23

1.5 Sequence 8140 from Patent EP2559767 NA coding protein psRNATarget
HI410015.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  ||=-|||||||||=||||||||||
targets:1   AUG-UACUCCCUCUGUUUCUUUUU   23

1.5 Sequence 8140 from Patent EP2074227 NA coding protein psRNATarget
LQ242145.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  ||=-|||||||||=||||||||||
targets:1   AUG-UACUCCCUCUGUUUCUUUUU   23

1.5 Sequence 8140 from Patent EP2985353 NA coding protein psRNATarget
NM_001143050.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||*||||||*|||||||||||||
targets:1080   AUAGUACUCCAUCCGUUUCUUUUU   1103

1.0 Zea mays uncharacterized LOC100216637 (LOC100216637), mRNA NA coding protein psRNATarget
BT037092.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||*||||||*|||||||||||||
targets:1080   AUAGUACUCCAUCCGUUUCUUUUU   1103

1.0 Zea mays full-length cDNA clone ZM_BFb0154F16 mRNA, complete cds NA coding protein psRNATarget
XM_008656936.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |*|*||||||||||||||||||||
targets:160   AAAGUACUCCCUCCGUUUCUUUUU   183

0.0 PREDICTED: Zea mays putative HLH DNA-binding domain superfamily protein (LOC100381500), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001352327.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  =||*||||||=||=||||||||||
targets:2665   GUAGUACUCCUUCUGUUUCUUUUU   2688

2.5 Zea mays delta-1-pyrroline-5-carboxylate synthase-like (LOC103630430), mRNA NA coding protein psRNATarget
XM_020544903.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||*||||||*|||||||||||||
targets:3137   AUAGUACUCCAUCCGUUUCUUUUU   3160

1.0 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020544902.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||*||||||*|||||||||||||
targets:3146   AUAGUACUCCAUCCGUUUCUUUUU   3169

1.0 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X1, mRNA NA coding protein psRNATarget
HI408945.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  *|*||||||||||||||||||||
targets:1   AAGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7070 from Patent EP2074227 NA coding protein psRNATarget
JB169406.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  *|*||||||||||||||||||||
targets:1   AAGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7070 from Patent EP2559767 NA coding protein psRNATarget
LQ242091.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  *|*||||||||||||||||||||
targets:1   AAGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 8086 from Patent EP2985353 NA coding protein psRNATarget
JB170422.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  *|*||||||||||||||||||||
targets:1   AAGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 8086 from Patent EP2559767 NA coding protein psRNATarget
LQ241075.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  *|*||||||||||||||||||||
targets:1   AAGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7070 from Patent EP2985353 NA coding protein psRNATarget
HI409961.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  *|*||||||||||||||||||||
targets:1   AAGUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 8086 from Patent EP2074227 NA coding protein psRNATarget
LQ239435.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  |||=-|||||||||||||||*||||
targets:1   AUAUAUACUCCCUCCGUUUCGUUUU   25

1.5 Sequence 5430 from Patent EP2985353 NA coding protein psRNATarget
JB167731.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  ||*=-||||||||||||||||||||
targets:1   AUUUGUACUCCCUCCGUUUCUUUUU   25

0.0 Sequence 5395 from Patent EP2559767 NA coding protein psRNATarget
HI407305.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  |||=-|||||||||||||||*||||
targets:1   AUAUAUACUCCCUCCGUUUCGUUUU   25

1.5 Sequence 5430 from Patent EP2074227 NA coding protein psRNATarget
JB167766.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  |||=-|||||||||||||||*||||
targets:1   AUAUAUACUCCCUCCGUUUCGUUUU   25

1.5 Sequence 5430 from Patent EP2559767 NA coding protein psRNATarget
HI407270.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  ||*=-||||||||||||||||||||
targets:1   AUUUGUACUCCCUCCGUUUCUUUUU   25

0.0 Sequence 5395 from Patent EP2074227 NA coding protein psRNATarget
LQ239400.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  ||*=-||||||||||||||||||||
targets:1   AUUUGUACUCCCUCCGUUUCUUUUU   25

0.0 Sequence 5395 from Patent EP2985353 NA coding protein psRNATarget
LQ235397.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  |||*-||=|||||||||||||||||
targets:95   AUAAAUAUUCCCUCCGUUUCUUUUU   119

1.0 Sequence 1392 from Patent EP2985353 NA coding protein psRNATarget
HI403267.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  |||*-||=|||||||||||||||||
targets:95   AUAAAUAUUCCCUCCGUUUCUUUUU   119

1.0 Sequence 1392 from Patent EP2074227 NA coding protein psRNATarget
JB163728.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  |||*-||=|||||||||||||||||
targets:95   AUAAAUAUUCCCUCCGUUUCUUUUU   119

1.0 Sequence 1392 from Patent EP2559767 NA coding protein psRNATarget
EU964901.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  **|*||||||||||||||||||||
targets:493   UAAGUACUCCCUCCGUUUCUUUUU   516

0.0 Zea mays clone 282450 mRNA sequence NA coding protein psRNATarget
XM_008669416.2
ncRNA:24   UAU-GAUGAGGGAGGCAAAGAAAAA   1
  =||-||||||*||||||||||||||
targets:484   GUAGCUACUCACUCCGUUUCUUUUU   508

1.0 PREDICTED: Zea mays hypothetical protein (LOC100275307), transcript variant X1, mRNA NA coding protein psRNATarget
EU974849.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  **|*||||||||||||||||||||
targets:565   UAAGUACUCCCUCCGUUUCUUUUU   588

0.0 Zea mays clone 459794 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
NM_001151882.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  **|*||||||||||||||||||||
targets:565   UAAGUACUCCCUCCGUUUCUUUUU   588

0.0 Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA NA coding protein psRNATarget
BT068381.1
ncRNA:24   UA-UGAUGAGGGAGGCAAAGAAAAA   1
  ||-|*|||||||||=||||||||||
targets:1104   AUGAAUACUCCCUCUGUUUCUUUUU   1128

1.5 Zea mays full-length cDNA clone ZM_BFb0135M15 mRNA, complete cds NA coding protein psRNATarget
EU956063.1
ncRNA:24   UA-UGAUGAGGGAGGCAAAGAAAAA   1
  ||-|*|||||||||=||||||||||
targets:1057   AUGAAUACUCCCUCUGUUUCUUUUU   1081

1.5 Zea mays clone 1556707 mRNA sequence NA coding protein psRNATarget
EU973028.1
ncRNA:24   UA-UGAUGAGGGAGGCAAAGAAAAA   1
  ||-|*|||||||||=||||||||||
targets:1163   AUGAAUACUCCCUCUGUUUCUUUUU   1187

1.5 Zea mays clone 391970 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU968044.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  |||=-|||||||||||||||*||||
targets:1019   AUAUAUACUCCCUCCGUUUCGUUUU   1043

1.5 Zea mays clone 313382 adenylyl-sulfate kinase 1 mRNA, complete cds NA coding protein psRNATarget
BT035546.1
ncRNA:24   UAUG-AUGAGGGAGGCAAAGAAAAA   1
  |||=-|||||||||||||||*||||
targets:907   AUAUAUACUCCCUCCGUUUCGUUUU   931

1.5 Zea mays full-length cDNA clone ZM_BFb0068P01 mRNA, complete cds NA coding protein psRNATarget
BT088158.1
ncRNA:24   UA-UGAUGAGGGAGGCAAAGAAAAA   1
  ||-|*|||||||||=||||||||||
targets:1197   AUGAAUACUCCCUCUGUUUCUUUUU   1221

1.5 Zea mays full-length cDNA clone ZM_BFc0038O11 mRNA, complete cds NA coding protein psRNATarget
XM_008656167.2
ncRNA:24   UA-UGAUGAGGGAGGCAAAGAAAAA   1
  ||-|*|||||||||=||||||||||
targets:1216   AUGAAUACUCCCUCUGUUUCUUUUU   1240

1.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X2, mRNA NA coding protein psRNATarget
BT035950.1
ncRNA:24   UA-UGAUGAGGGAGGCAAAGAAAAA   1
  ||-|*|||||||||=||||||||||
targets:1397   AUGAAUACUCCCUCUGUUUCUUUUU   1421

1.5 Zea mays full-length cDNA clone ZM_BFb0089G20 mRNA, complete cds NA coding protein psRNATarget
NM_001138729.1
ncRNA:24   UA-UGAUGAGGGAGGCAAAGAAAAA   1
  ||-|*|||||||||=||||||||||
targets:1397   AUGAAUACUCCCUCUGUUUCUUUUU   1421

1.5 Zea mays uncharacterized LOC100193630 (LOC100193630), mRNA NA coding protein psRNATarget
XM_008656166.2
ncRNA:24   UA-UGAUGAGGGAGGCAAAGAAAAA   1
  ||-|*|||||||||=||||||||||
targets:1261   AUGAAUACUCCCUCUGUUUCUUUUU   1285

1.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020549872.1
ncRNA:24   UAUG----AUGAGGGAGGCAAAGAAAAA   1
  ||||----|||||||||||||||*||||
targets:1257   AUACGGUGUACUCCCUCCGUUUCGUUUU   1284

1.5 PREDICTED: Zea mays uncharacterized LOC100382893 (LOC100382893), transcript variant X1, mRNA NA coding protein psRNATarget
BT065656.1
ncRNA:24   UAUG----AUGAGGGAGGCAAAGAAAAA   1
  ||||----|||||||||||||||*||||
targets:1424   AUACGGUGUACUCCCUCCGUUUCGUUUU   1451

1.5 Zea mays full-length cDNA clone ZM_BFc0005B18 mRNA, complete cds NA coding protein psRNATarget
NM_001175582.1
ncRNA:24   UAUG----AUGAGGGAGGCAAAGAAAAA   1
  ||||----|||||||||||||||*||||
targets:1424   AUACGGUGUACUCCCUCCGUUUCGUUUU   1451

1.5 Zea mays uncharacterized LOC100382893 (LOC100382893), mRNA NA coding protein psRNATarget
LQ241458.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  ***||||||||||||||||||||
targets:1   CCAUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7453 from Patent EP2985353 NA coding protein psRNATarget
JB169789.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  ***||||||||||||||||||||
targets:1   CCAUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7453 from Patent EP2559767 NA coding protein psRNATarget
HI409328.1
ncRNA:23   AUGAUGAGGGAGGCAAAGAAAAA   1
  ***||||||||||||||||||||
targets:1   CCAUACUCCCUCCGUUUCUUUUU   23

0.0 Sequence 7453 from Patent EP2074227 NA coding protein psRNATarget
LQ235486.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *|**||||||||||||||||||||
targets:7   UUCGUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1481 from Patent EP2985353 NA coding protein psRNATarget
HI403356.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *|**||||||||||||||||||||
targets:7   UUCGUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1481 from Patent EP2074227 NA coding protein psRNATarget
JB163817.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *|**||||||||||||||||||||
targets:7   UUCGUACUCCCUCCGUUUCUUUUU   30

0.0 Sequence 1481 from Patent EP2559767 NA coding protein psRNATarget
EZ112557.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  =*=*||||||||||||||||||||
targets:44   GAGGUACUCCCUCCGUUUCUUUUU   67

0.0 TSA: Zea mays contig48218, mRNA sequence NA coding protein psRNATarget
BT067066.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |*==|||||||||||||||||||*
targets:415   AAGUUACUCCCUCCGUUUCUUUUA   438

1.0 Zea mays full-length cDNA clone ZM_BFb0180L06 mRNA, complete cds NA coding protein psRNATarget
NM_001148943.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |*=*||||||||||||||||||||
targets:1539   AAGAUACUCCCUCCGUUUCUUUUU   1562

0.0 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
XM_008677351.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |*=*||||||||||||||||||||
targets:2053   AAGGUACUCCCUCCGUUUCUUUUU   2076

0.0 PREDICTED: Zea mays hypothetical protein (LOC103651662), mRNA NA coding protein psRNATarget
LQ240753.1
ncRNA:24   UAUGAUGAGGGAGG-CAAAGAAAAA   1
  *||*||||||||||-||||||||||
targets:4   UUAGUACUCCCUCCAGUUUCUUUUU   28

3.0 Sequence 6748 from Patent EP2985353 NA coding protein psRNATarget
JB169084.1
ncRNA:24   UAUGAUGAGGGAGG-CAAAGAAAAA   1
  *||*||||||||||-||||||||||
targets:4   UUAGUACUCCCUCCAGUUUCUUUUU   28

3.0 Sequence 6748 from Patent EP2559767 NA coding protein psRNATarget
HI408623.1
ncRNA:24   UAUGAUGAGGGAGG-CAAAGAAAAA   1
  *||*||||||||||-||||||||||
targets:4   UUAGUACUCCCUCCAGUUUCUUUUU   28

3.0 Sequence 6748 from Patent EP2074227 NA coding protein psRNATarget
EU952378.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||-||||||||||||||*|||||
targets:710   AUA-UACUCCCUCCGUUUAUUUUU   732

1.5 Zea mays clone 1278936 mitochondrial import inner membrane translocase subunit TIM14 mRNA, complete cds; nuclear gene for mitochondrial product NA coding protein psRNATarget
BT065536.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |*|*||||||||||||||=|||||
targets:784   AAAGUACUCCCUCCGUUUUUUUUU   807

1.5 Zea mays full-length cDNA clone ZM_BFb0224G04 mRNA, complete cds NA coding protein psRNATarget
BT017382.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |||-||||||||||||||||*|||
targets:692   AUA-UACUCCCUCCGUUUCUCUUU   714

1.5 Zea mays clone EL01N0326E08.c mRNA sequence NA coding protein psRNATarget
NM_001156378.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |*|*||||||||||||||=|||||
targets:842   AAAGUACUCCCUCCGUUUUUUUUU   865

1.5 Zea mays ribulose-phosphate 3-epimerase (LOC100283478), mRNA NA coding protein psRNATarget
EU964879.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  |*|*||||||||||||||=|||||
targets:843   AAAGUACUCCCUCCGUUUUUUUUU   866

1.5 Zea mays clone 282287 ribulose-phosphate 3-epimerase mRNA, complete cds NA coding protein psRNATarget
HI407269.1
ncRNA:23   AUG--AUGAGGGAGGCAAAGAAAAA   1
  |||--|||||||||||||||*||||
targets:1   UACGGUACUCCCUCCGUUUCGUUUU   25

1.5 Sequence 5394 from Patent EP2074227 NA coding protein psRNATarget
LQ239399.1
ncRNA:23   AUG--AUGAGGGAGGCAAAGAAAAA   1
  |||--|||||||||||||||*||||
targets:1   UACGGUACUCCCUCCGUUUCGUUUU   25

1.5 Sequence 5394 from Patent EP2985353 NA coding protein psRNATarget
JB167730.1
ncRNA:23   AUG--AUGAGGGAGGCAAAGAAAAA   1
  |||--|||||||||||||||*||||
targets:1   UACGGUACUCCCUCCGUUUCGUUUU   25

1.5 Sequence 5394 from Patent EP2559767 NA coding protein psRNATarget
EU945792.1
ncRNA:24   UA-UGAUGAGGGAGGCAAAGAAAAA   1
  ||-|=||||=||||||||||*||||
targets:1173   AUGAUUACUUCCUCCGUUUCGUUUU   1197

2.5 Zea mays clone 285684 mRNA sequence NA coding protein psRNATarget
XM_020541158.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *|*=|||||||||||||||||||*
targets:1024   UUCUUACUCCCUCCGUUUCUUUUA   1047

1.0 PREDICTED: Zea mays acid phosphatase 1 (LOC103633566), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020541157.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *|*=|||||||||||||||||||*
targets:1026   UUCUUACUCCCUCCGUUUCUUUUA   1049

1.0 PREDICTED: Zea mays acid phosphatase 1 (LOC103633566), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008655254.2
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *|*=|||||||||||||||||||*
targets:1045   UUCUUACUCCCUCCGUUUCUUUUA   1068

1.0 PREDICTED: Zea mays acid phosphatase 1 (LOC103633566), transcript variant X1, mRNA NA coding protein psRNATarget
EU964554.1
ncRNA:24   UA-UGAUGAGGGAGGCAAAGAAAAA   1
  ||-|=||||=||||||||||*||||
targets:1322   AUGAUUACUUCCUCCGUUUCGUUUU   1346

2.5 Zea mays clone 279840 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
JB169555.1
ncRNA:20   AUGAGGGAGGCAAAGAAAAA   1
  |||||||||=||||||||||
targets:1   UACUCCCUCUGUUUCUUUUU   20

1.5 Sequence 7219 from Patent EP2559767 NA coding protein psRNATarget
HI409094.1
ncRNA:20   AUGAGGGAGGCAAAGAAAAA   1
  |||||||||=||||||||||
targets:1   UACUCCCUCUGUUUCUUUUU   20

1.5 Sequence 7219 from Patent EP2074227 NA coding protein psRNATarget
LQ241224.1
ncRNA:20   AUGAGGGAGGCAAAGAAAAA   1
  |||||||||=||||||||||
targets:1   UACUCCCUCUGUUUCUUUUU   20

1.5 Sequence 7219 from Patent EP2985353 NA coding protein psRNATarget
JB169315.1
ncRNA:20   AUGAGGGAGGCAAAGAAAAA   1
  |||||=||||||||||||||
targets:1   UACUCUCUCCGUUUCUUUUU   20

1.0 Sequence 6979 from Patent EP2559767 NA coding protein psRNATarget
HI408854.1
ncRNA:20   AUGAGGGAGGCAAAGAAAAA   1
  |||||=||||||||||||||
targets:1   UACUCUCUCCGUUUCUUUUU   20

1.0 Sequence 6979 from Patent EP2074227 NA coding protein psRNATarget
LQ240984.1
ncRNA:20   AUGAGGGAGGCAAAGAAAAA   1
  |||||=||||||||||||||
targets:1   UACUCUCUCCGUUUCUUUUU   20

1.0 Sequence 6979 from Patent EP2985353 NA coding protein psRNATarget
JB167785.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *||*|||||||||||||||*||||
targets:2   UUAAUACUCCCUCCGUUUCGUUUU   25

1.5 Sequence 5449 from Patent EP2559767 NA coding protein psRNATarget
LQ239454.1
ncRNA:24   UAUGAUGAGGGAGGCAAAGAAAAA   1
  *||*|||||||||||||||*||||
targets:2   UUAAUACUCCCUCCGUUUCGUUUU   25

1.5 Sequence 5449 from Patent EP2985353 NA coding protein psRNATarget
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