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BaseInfo

ncRNA ID	novel_zma_miR3981
Species	Zea mays
Class	miRNA
Genome position	Chr2:233243838-233243899 [+]
Reference genome	RefGen_v4
Source	SRR2287159;SRR2287164
Length	23
Mature sequence(if miRNA)	1 - AACUAGAACGGAGCGGCUCUAUU - 23
Stem-loop(if miRNA)	---   -     CG  G           -       AAC UAGAA  GA CGGCUCUAUUC CAGU    ||| |||||  || ||||||||||| |||U    UUG GUCUU  CU GCCGAGGUAAG GUUU GGU   C     AU  A           A
Stem-loop sequence	AACUAGAACGGAGCGGCUCUAUUCCAGUUUUUGAGAAUGGAGCCGAUCUAUUCUGCGUUUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT084215.2	ncRNA:23   UUAUCUCGGCGAGGCAAGAUCAA   1   ||||||||||||||||||||||| targets:1134   AAUAGAGCCGCUCCGUUCUAGUU   1156 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0090B20 mRNA, complete cds	NA	coding protein	psRNATarget
JB170147.1	ncRNA:23   UUA-UCUCGGCGAGGCAAGAUCAA   1   |||-=|||||*||||||||||||| targets:103   AAUUGGAGCCACUCCGUUCUAGUU   126 Target Full Sequence	1.0	Sequence 7811 from Patent EP2559767	NA	coding protein	psRNATarget
HI409686.1	ncRNA:23   UUA-UCUCGGCGAGGCAAGAUCAA   1   |||-=|||||*||||||||||||| targets:103   AAUUGGAGCCACUCCGUUCUAGUU   126 Target Full Sequence	1.0	Sequence 7811 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241816.1	ncRNA:23   UUA-UCUCGGCGAGGCAAGAUCAA   1   |||-=|||||*||||||||||||| targets:103   AAUUGGAGCCACUCCGUUCUAGUU   126 Target Full Sequence	1.0	Sequence 7811 from Patent EP2985353	NA	coding protein	psRNATarget
LQ240756.1	ncRNA:23   UUA-UCUCGGCGAGGCAAGAUCAA   1   |||-=||||**||||||||||||| targets:135   AAUUGGAGCGACUCCGUUCUAGUU   158 Target Full Sequence	2.0	Sequence 6751 from Patent EP2985353	NA	coding protein	psRNATarget
JB169087.1	ncRNA:23   UUA-UCUCGGCGAGGCAAGAUCAA   1   |||-=||||**||||||||||||| targets:135   AAUUGGAGCGACUCCGUUCUAGUU   158 Target Full Sequence	2.0	Sequence 6751 from Patent EP2559767	NA	coding protein	psRNATarget
HI408626.1	ncRNA:23   UUA-UCUCGGCGAGGCAAGAUCAA   1   |||-=||||**||||||||||||| targets:135   AAUUGGAGCGACUCCGUUCUAGUU   158 Target Full Sequence	2.0	Sequence 6751 from Patent EP2074227	NA	coding protein	psRNATarget
BT037634.1	ncRNA:23   UUA--UCUCGGCGAGGCAAGAUCAA   1   =||--|||||*|||||*|||||||| targets:407   GAUGGAGAGCGGCUCCAUUCUAGUU   431 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0184G18 mRNA, complete cds	NA	coding protein	psRNATarget