Search result

BaseInfo

ncRNA ID novel_zma_miR3977
Species Zea mays
Class miRNA
Genome position Chr2:16394853-16394946 [+]
Reference genome RefGen_v4
Source SRR2287159
Length 24
Mature sequence(if miRNA) 1 - UCCAUAUGGAUUGAUGGGGAUUGA - 24
Stem-loop(if miRNA) --             AU         -----------         A  CCC
  UCCAUAUGGAUUG  GGGGAUUGA           GGGGGUUUU AU   U
  |||||||||||||  |||||||||           ||||||||| ||   A
  AGGUAUACCUAAC  CCCCUAACU           CCCUUAAAA UG   G
UU             CU         GUGCCUAACUU         C  AAC
Stem-loop sequence UCCAUAUGGAUUGAUGGGGAUUGAGGGGGUUUUAAUCCCUAGCAAGUCAAAAUUCCCUUCAAUCCGUGUCAAUCCCCUCCAAUCCAUAUGGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ241947.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||*||||||||||||||
targets:80   UCAAUCCCCCUCAAUCCAUAUGGA   103

1.0 Sequence 7942 from Patent EP2985353 NA coding protein psRNATarget
HI409817.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||*||||||||||||||
targets:80   UCAAUCCCCCUCAAUCCAUAUGGA   103

1.0 Sequence 7942 from Patent EP2074227 NA coding protein psRNATarget
JB170278.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||*||||||||||||||
targets:80   UCAAUCCCCCUCAAUCCAUAUGGA   103

1.0 Sequence 7942 from Patent EP2559767 NA coding protein psRNATarget
BT061531.2
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||*||||||||||||||
targets:849   UCAAUCCCCCUCAAUCCAUAUGGA   872

1.0 Zea mays full-length cDNA clone ZM_BFb0155L17 mRNA, complete cds NA coding protein psRNATarget
BT064472.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||*||||||||||||||
targets:1421   UCAAUCCCCUUCAAUCCAUAUGGA   1444

1.0 Zea mays full-length cDNA clone ZM_BFc0172D22 mRNA, complete cds NA coding protein psRNATarget
BT040193.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||*||||||||||||||
targets:1465   UCAAUCCCCUUCAAUCCAUAUGGA   1488

1.0 Zea mays full-length cDNA clone ZM_BFc0070L08 mRNA, complete cds NA coding protein psRNATarget
AY105910.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||*||||||||||||||
targets:1483   UCAAUCCCCUUCAAUCCAUAUGGA   1506

1.0 Zea mays PCO106969 mRNA sequence NA coding protein psRNATarget
NM_001148011.2
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||*||||||||||||||
targets:1497   UCAAUCCCCUUCAAUCCAUAUGGA   1520

1.0 Zea mays uncharacterized LOC100273594 (AY105910), mRNA NA coding protein psRNATarget
BT041454.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||*||||||||||||||
targets:1497   UCAAUCCCCUUCAAUCCAUAUGGA   1520

1.0 Zea mays full-length cDNA clone ZM_BFc0061I22 mRNA, complete cds NA coding protein psRNATarget
EU955707.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||*||||||||||||||
targets:606   UCAAUCCCCCUCAAUCCAUAUGGA   629

1.0 Zea mays clone 1543022 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
XM_008680349.2
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||*||||||||||||||
targets:1969   UCAAUCCCCCUCAAUCCAUAUGGA   1992

1.0 PREDICTED: Zea mays peptidase/ serine-type peptidase (LOC100284377), transcript variant X1, mRNA NA coding protein psRNATarget
BT055069.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||*||||||||||||||
targets:976   UCAAUCCCCUUCAAUCCAUAUGGA   999

1.0 Zea mays full-length cDNA clone ZM_BFb0132H13 mRNA, complete cds NA coding protein psRNATarget
JB169285.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||=|*||||||||||||||
targets:81   UCAAUCCUCCUCAAUCCAUAUGGA   104

2.0 Sequence 6949 from Patent EP2559767 NA coding protein psRNATarget
LQ240954.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||=|*||||||||||||||
targets:81   UCAAUCCUCCUCAAUCCAUAUGGA   104

2.0 Sequence 6949 from Patent EP2985353 NA coding protein psRNATarget
HI408824.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||=|*||||||||||||||
targets:81   UCAAUCCUCCUCAAUCCAUAUGGA   104

2.0 Sequence 6949 from Patent EP2074227 NA coding protein psRNATarget
EU962730.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  ||||||||=*||||||||||||||
targets:1073   UCAAUCCCUCUCAAUCCAUAUGGA   1096

2.0 Zea mays clone 245054 mRNA sequence NA coding protein psRNATarget
XM_008658331.2
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  ||=||||||*||||||||||||||
targets:1698   UCGAUCCCCUUCAAUCCAUAUGGA   1721

1.0 PREDICTED: Zea mays putative protein phosphatase 2C 46 (LOC103635969), mRNA NA coding protein psRNATarget
XM_008654469.2
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  ||||||=||*||||||||||||||
targets:3120   UCAAUCUCCUUCAAUCCAUAUGGA   3143

2.0 PREDICTED: Zea mays U-box domain-containing protein 35 (LOC103632728), mRNA NA coding protein psRNATarget
EU962101.1
ncRNA:24   AGUUAGGGG-UAGUUAGGUAUACCU   1
  |||=|=|||-|||||||||||||||
targets:632   UCAGUUCCCUAUCAAUCCAUAUGGA   656

3.0 Zea mays clone 240206 mRNA sequence NA coding protein psRNATarget
BT069555.1
ncRNA:24   AGUUAGGGG-UAGUUAGGUAUACCU   1
  |||=|=|||-|||||||||||||||
targets:615   UCAGUUCCCUAUCAAUCCAUAUGGA   639

3.0 Zea mays full-length cDNA clone ZM_BFb0172J21 mRNA, complete cds NA coding protein psRNATarget
XM_008660635.2
ncRNA:24   AGUUAGGGG-UAGUUAGGUAUACCU   1
  |||=|=|||-|||||||||||||||
targets:1003   UCAGUUCCCUAUCAAUCCAUAUGGA   1027

3.0 PREDICTED: Zea mays NAD(P)-binding Rossmann-fold superfamily protein (LOC100383292), transcript variant X3, mRNA NA coding protein psRNATarget
BT067124.1
ncRNA:24   AGUUAGGGG-UAGUUAGGUAUACCU   1
  |||=|=|||-|||||||||||||||
targets:1010   UCAGUUCCCUAUCAAUCCAUAUGGA   1034

3.0 Zea mays full-length cDNA clone ZM_BFb0202O23 mRNA, complete cds NA coding protein psRNATarget
XM_008660634.2
ncRNA:24   AGUUAGGGG-UAGUUAGGUAUACCU   1
  |||=|=|||-|||||||||||||||
targets:1049   UCAGUUCCCUAUCAAUCCAUAUGGA   1073

3.0 PREDICTED: Zea mays NAD(P)-binding Rossmann-fold superfamily protein (LOC100383292), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008683153.2
ncRNA:24   AGUUAGGGG-UAGUUAGGUAUACCU   1
  |||=|=|||-|||||||||||||||
targets:1012   UCAGUUCCCUAUCAAUCCAUAUGGA   1036

3.0 PREDICTED: Zea mays NAD(P)-binding Rossmann-fold superfamily protein (LOC100304323), transcript variant X3, mRNA NA coding protein psRNATarget
NM_001175952.1
ncRNA:24   AGUUAGGGG-UAGUUAGGUAUACCU   1
  |||=|=|||-|||||||||||||||
targets:1095   UCAGUUCCCUAUCAAUCCAUAUGGA   1119

3.0 Zea mays NAD(P)-binding Rossmann-fold superfamily protein (LOC100383292), mRNA NA coding protein psRNATarget
BT066814.1
ncRNA:24   AGUUAGGGG-UAGUUAGGUAUACCU   1
  |||=|=|||-|||||||||||||||
targets:1095   UCAGUUCCCUAUCAAUCCAUAUGGA   1119

3.0 Zea mays full-length cDNA clone ZM_BFb0077O12 mRNA, complete cds NA coding protein psRNATarget
XM_020537527.1
ncRNA:24   AGUUAGGGG-UAGUUAGGUAUACCU   1
  |||=|=|||-|||||||||||||||
targets:1014   UCAGUUCCCUAUCAAUCCAUAUGGA   1038

3.0 PREDICTED: Zea mays NAD(P)-binding Rossmann-fold superfamily protein (LOC100304323), transcript variant X2, mRNA NA coding protein psRNATarget
BT060955.1
ncRNA:24   AGUUAGGGG-UAGUUAGGUAUACCU   1
  |||=|=|||-|||||||||||||||
targets:1098   UCAGUUCCCUAUCAAUCCAUAUGGA   1122

3.0 Zea mays full-length cDNA clone ZM_BFb0076I15 mRNA, complete cds NA coding protein psRNATarget
XM_008660631.2
ncRNA:24   AGUUAGGGG-UAGUUAGGUAUACCU   1
  |||=|=|||-|||||||||||||||
targets:1145   UCAGUUCCCUAUCAAUCCAUAUGGA   1169

3.0 PREDICTED: Zea mays NAD(P)-binding Rossmann-fold superfamily protein (LOC100383292), transcript variant X1, mRNA NA coding protein psRNATarget
BT060844.1
ncRNA:24   AGUUAGGGG-UAGUUAGGUAUACCU   1
  |||=|=|||-|||||||||||||||
targets:1196   UCAGUUCCCUAUCAAUCCAUAUGGA   1220

3.0 Zea mays full-length cDNA clone ZM_BFb0059M12 mRNA, complete cds NA coding protein psRNATarget
NM_001165764.1
ncRNA:24   AGUUAGGGG-UAGUUAGGUAUACCU   1
  |||=|=|||-|||||||||||||||
targets:1196   UCAGUUCCCUAUCAAUCCAUAUGGA   1220

3.0 Zea mays NAD(P)-binding Rossmann-fold superfamily protein (LOC100304323), mRNA NA coding protein psRNATarget
XM_020537530.1
ncRNA:24   AGUUAGGGG-UAGUUAGGUAUACCU   1
  |||=|=|||-|||||||||||||||
targets:1151   UCAGUUCCCUAUCAAUCCAUAUGGA   1175

3.0 PREDICTED: Zea mays NAD(P)-binding Rossmann-fold superfamily protein (LOC100304323), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020537526.1
ncRNA:24   AGUUAGGGG-UAGUUAGGUAUACCU   1
  |||=|=|||-|||||||||||||||
targets:1200   UCAGUUCCCUAUCAAUCCAUAUGGA   1224

3.0 PREDICTED: Zea mays NAD(P)-binding Rossmann-fold superfamily protein (LOC100304323), transcript variant X1, mRNA NA coding protein psRNATarget
EU972313.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  ||=||||||*|||||||||||||*
targets:30   UCGAUCCCCCUCAAUCCAUAUGGC   53

2.0 Zea mays clone 379548 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU951312.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |*|||||||*||||||||||||||
targets:370   UGAAUCCCCCUCAAUCCAUAUGGA   393

1.0 Zea mays clone 695515 mRNA sequence NA coding protein psRNATarget
NM_001348011.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||**|||||||||||||
targets:445   UCAAUCCCCUCCAAUCCAUAUGGA   468

2.0 Zea mays hypothetical protein (LOC100277538), mRNA NA coding protein psRNATarget
XM_020539810.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||**|||||||||||||
targets:699   UCAAUCCCCUCCAAUCCAUAUGGA   722

2.0 PREDICTED: Zea mays uncharacterized LOC109940330 (LOC109940330), mRNA NA coding protein psRNATarget
AY104043.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |*|||||||*||||||||||||||
targets:910   UGAAUCCCCCUCAAUCCAUAUGGA   933

1.0 Zea mays PCO145885 mRNA sequence NA coding protein psRNATarget
BT062922.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||**|||||||||||||
targets:898   UCAAUCCCCUCCAAUCCAUAUGGA   921

2.0 Zea mays full-length cDNA clone ZM_BFc0007N17 mRNA, complete cds NA coding protein psRNATarget
BT068594.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |*|||||||*||||||||||||||
targets:907   UGAAUCCCCCUCAAUCCAUAUGGA   930

1.0 Zea mays full-length cDNA clone ZM_BFb0348O14 mRNA, complete cds NA coding protein psRNATarget
EU959055.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||**|||||||||||||
targets:846   UCAAUCCCCUCCAAUCCAUAUGGA   869

2.0 Zea mays clone 209821 mRNA sequence NA coding protein psRNATarget
EU959258.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||**|||||||||||||
targets:844   UCAAUCCCCUCCAAUCCAUAUGGA   867

2.0 Zea mays clone 213262 mitochondrial import inner membrane translocase subunit tim23 mRNA, complete cds; nuclear gene for mitochondrial product NA coding protein psRNATarget
EU959053.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||**|||||||||||||
targets:844   UCAAUCCCCUCCAAUCCAUAUGGA   867

2.0 Zea mays clone 209789 mitochondrial import inner membrane translocase subunit tim23 mRNA, complete cds; nuclear gene for mitochondrial product NA coding protein psRNATarget
EU959345.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||**|||||||||||||
targets:845   UCAAUCCCCUCCAAUCCAUAUGGA   868

2.0 Zea mays clone 217290 mitochondrial import inner membrane translocase subunit tim23 mRNA, complete cds; nuclear gene for mitochondrial product NA coding protein psRNATarget
EU972032.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |*|||||||*||||||||||||||
targets:937   UGAAUCCCCCUCAAUCCAUAUGGA   960

1.0 Zea mays clone 373636 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
NM_001151506.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |*|||||||*||||||||||||||
targets:937   UGAAUCCCCCUCAAUCCAUAUGGA   960

1.0 Zea mays ER membrane protein complex subunit 7-like protein (pco145885(696)), mRNA NA coding protein psRNATarget
XM_008666525.2
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||**|||||||||||||
targets:917   UCAAUCCCCUCCAAUCCAUAUGGA   940

2.0 PREDICTED: Zea mays mitochondrial import inner membrane translocase subunit TIM23-1 (LOC100282051), mRNA NA coding protein psRNATarget
BT068463.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |*|||||||*||||||||||||||
targets:1209   UGAAUCCCCCUCAAUCCAUAUGGA   1232

1.0 Zea mays full-length cDNA clone ZM_BFb0213N24 mRNA, complete cds NA coding protein psRNATarget
NM_001138093.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  ||||||*||*||||||||||||||
targets:1608   UCAAUCACCCUCAAUCCAUAUGGA   1631

2.0 Zea mays uncharacterized LOC100192906 (LOC100192906), mRNA NA coding protein psRNATarget
BT035012.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  ||||||*||*||||||||||||||
targets:1608   UCAAUCACCCUCAAUCCAUAUGGA   1631

2.0 Zea mays full-length cDNA clone ZM_BFb0031M23 mRNA, complete cds NA coding protein psRNATarget
XM_020545207.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||**|||||||||||||
targets:22   UCAAUCCCCUCCAAUCCAUAUGGA   45

2.0 PREDICTED: Zea mays solute carrier family 25 member 44 (LOC100384216), mRNA NA coding protein psRNATarget
XM_008673290.2
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||**|||||||||||||
targets:1980   UCAAUCCCCUCCAAUCCAUAUGGA   2003

2.0 PREDICTED: Zea mays uncharacterized LOC103648912 (LOC103648912), mRNA NA coding protein psRNATarget
XM_020548987.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||**|||||||||||||
targets:1980   UCAAUCCCCUCCAAUCCAUAUGGA   2003

2.0 PREDICTED: Zea mays uncharacterized LOC103648913 (LOC103648913), mRNA NA coding protein psRNATarget
EU956568.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||**|||||||||||||
targets:1630   UCAAUCCCCUCCAAUCCAUAUGGA   1653

2.0 Zea mays clone 1566799 mRNA sequence NA coding protein psRNATarget
XM_008658561.2
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||||**|||||||||||||
targets:301   UCAAUCCCCUCCAAUCCAUAUGGA   324

2.0 PREDICTED: Zea mays mitogen-activated protein kinase kinase kinase 2 (LOC103636208), mRNA NA coding protein psRNATarget
LQ239468.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |=|||||||*|||||||*||||||
targets:73   UUAAUCCCCCUCAAUCCCUAUGGA   96

2.5 Sequence 5463 from Patent EP2985353 NA coding protein psRNATarget
HI407338.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |=|||||||*|||||||*||||||
targets:73   UUAAUCCCCCUCAAUCCCUAUGGA   96

2.5 Sequence 5463 from Patent EP2074227 NA coding protein psRNATarget
JB167799.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |=|||||||*|||||||*||||||
targets:73   UUAAUCCCCCUCAAUCCCUAUGGA   96

2.5 Sequence 5463 from Patent EP2559767 NA coding protein psRNATarget
BT064935.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  ||||||||=**|||||||||||||
targets:836   UCAAUCCCUUCCAAUCCAUAUGGA   859

3.0 Zea mays full-length cDNA clone ZM_BFc0035J15 mRNA, complete cds NA coding protein psRNATarget
EU953075.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  ||||||=||**|||||||||||||
targets:1008   UCAAUCUCCUCCAAUCCAUAUGGA   1031

3.0 Zea mays clone 1380292 mRNA sequence NA coding protein psRNATarget
XM_020548080.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |=|||||||**|||||||||||||
targets:1160   UUAAUCCCCUCCAAUCCAUAUGGA   1183

2.0 PREDICTED: Zea mays translation initiation factor IF-2-like (LOC109943947), mRNA NA coding protein psRNATarget
BT055467.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |=|||||||**|||||||||||||
targets:1198   UUAAUCCCCUCCAAUCCAUAUGGA   1221

2.0 Zea mays full-length cDNA clone ZM_BFb0279E03 mRNA, complete cds NA coding protein psRNATarget
XM_020537815.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |=|||||||*|||||||*||||||
targets:2603   UUAAUCCCCCUCAAUCCCUAUGGA   2626

2.5 PREDICTED: Zea mays uncharacterized protein DDB_G0284459 (LOC103627942), mRNA NA coding protein psRNATarget
XM_020545025.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  ||||||=||**|||||||||||||
targets:335   UCAAUCUCCUCCAAUCCAUAUGGA   358

3.0 PREDICTED: Zea mays Phosphoglycerate mutase-like protein AT74H (LOC100280403), transcript variant X6, mRNA NA coding protein psRNATarget
XM_020547439.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  *||||||||*|||||||*||||||
targets:3927   CCAAUCCCCCUCAAUCCCUAUGGA   3950

2.5 PREDICTED: Zea mays hypothetical protein (LOC100194067), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008653299.2
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |==||||||*|||||||*||||||
targets:820   UUGAUCCCCCUCAAUCCCUAUGGA   843

2.5 PREDICTED: Zea mays protein UXT (LOC100284726), transcript variant X1, mRNA NA coding protein psRNATarget
BT042044.2
ncRNA:24   AG-UUAGGGGUAGUUAGGUAUACCU   1
  ||-||||||**||||||||||||||
targets:1367   UCUAAUCCCACUCAAUCCAUAUGGA   1391

2.0 Zea mays full-length cDNA clone ZM_BFb0117M08 mRNA, complete cds NA coding protein psRNATarget
XM_008669549.1
ncRNA:24   AG-UUAGGGGUAGUUAGGUAUACCU   1
  ||-||||||**||||||||||||||
targets:2084   UCUAAUCCCACUCAAUCCAUAUGGA   2108

2.0 PREDICTED: Zea mays hypothetical protein (LOC100279312), transcript variant X1, mRNA NA coding protein psRNATarget
EZ101759.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |*||*||||*||||||||||||||
targets:93   UAAAACCCCCUCAAUCCAUAUGGA   116

1.0 TSA: Zea mays contig37415, mRNA sequence NA coding protein psRNATarget
JB167414.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||*|**|||||||||||||
targets:11   UCAAUCCACUCCAAUCCAUAUGGA   34

3.0 Sequence 5078 from Patent EP2559767 NA coding protein psRNATarget
LQ239083.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||*|**|||||||||||||
targets:11   UCAAUCCACUCCAAUCCAUAUGGA   34

3.0 Sequence 5078 from Patent EP2985353 NA coding protein psRNATarget
HI406953.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||*|**|||||||||||||
targets:11   UCAAUCCACUCCAAUCCAUAUGGA   34

3.0 Sequence 5078 from Patent EP2074227 NA coding protein psRNATarget
NM_001152975.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||*|**|||||||||||||
targets:817   UCAAUCCACUCCAAUCCAUAUGGA   840

3.0 Zea mays glycosyltransferase family protein 28 (IDP1988), mRNA NA coding protein psRNATarget
BT055408.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||*|**|||||||||||||
targets:817   UCAAUCCACUCCAAUCCAUAUGGA   840

3.0 Zea mays full-length cDNA clone ZM_BFb0147G07 mRNA, complete cds NA coding protein psRNATarget
XM_008649521.2
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||*|**|||||||||||||
targets:869   UCAAUCCACUCCAAUCCAUAUGGA   892

3.0 PREDICTED: Zea mays glycosyltransferase family protein 28 (IDP1988), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008649520.2
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |||||||*|**|||||||||||||
targets:898   UCAAUCCACUCCAAUCCAUAUGGA   921

3.0 PREDICTED: Zea mays glycosyltransferase family protein 28 (IDP1988), transcript variant X1, mRNA NA coding protein psRNATarget
BT024099.1
ncRNA:24   AGU-UAGGGGUAGUUAGGUAUACCU   1
  |||-|*=||=||||||||||||||*
targets:907   UCAGAAUCCUAUCAAUCCAUAUGGU   931

3.0 Zea mays clone EL01N0525A09 mRNA sequence NA coding protein psRNATarget
EU953278.1
ncRNA:24   AGU-UAGGGGUAGUUAGGUAUACCU   1
  |||-|*=||=||||||||||||||*
targets:903   UCAGAAUCCUAUCAAUCCAUAUGGU   927

3.0 Zea mays clone 1396123 UDP-arabinose 4-epimerase 2 mRNA, complete cds NA coding protein psRNATarget
NM_001153615.2
ncRNA:24   AGU-UAGGGGUAGUUAGGUAUACCU   1
  |||-|*=||=||||||||||||||*
targets:894   UCAGAAUCCUAUCAAUCCAUAUGGU   918

3.0 Zea mays uncharacterized LOC100280696 (gpm461b), mRNA NA coding protein psRNATarget
BT063287.1
ncRNA:24   AGU-UAGGGGUAGUUAGGUAUACCU   1
  |||-|*=||=||||||||||||||*
targets:894   UCAGAAUCCUAUCAAUCCAUAUGGU   918

3.0 Zea mays full-length cDNA clone ZM_BFc0048G03 mRNA, complete cds NA coding protein psRNATarget
BT024027.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  *=||||||=**|||||||||||||
targets:1643   CUAAUCCCUUCCAAUCCAUAUGGA   1666

3.0 Zea mays clone EL01N0420G12 mRNA sequence NA coding protein psRNATarget
NM_001153131.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  *=||||||=**|||||||||||||
targets:2321   CUAAUCCCUUCCAAUCCAUAUGGA   2344

3.0 Zea mays putative protein kinase superfamily protein (LOC100280200), mRNA NA coding protein psRNATarget
BT055765.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  *=||||||=**|||||||||||||
targets:2321   CUAAUCCCUUCCAAUCCAUAUGGA   2344

3.0 Zea mays full-length cDNA clone ZM_BFb0178P09 mRNA, complete cds NA coding protein psRNATarget
BT041645.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |*||*|||=*||||||||||||||
targets:1309   UAAAACCCUCUCAAUCCAUAUGGA   1332

2.0 Zea mays full-length cDNA clone ZM_BFb0022N16 mRNA, complete cds NA coding protein psRNATarget
BT064813.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |*||*|||=*||||||||||||||
targets:1194   UAAAACCCUCUCAAUCCAUAUGGA   1217

2.0 Zea mays full-length cDNA clone ZM_BFb0171N23 mRNA, complete cds NA coding protein psRNATarget
BT085188.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |*||*|||=*||||||||||||||
targets:1350   UAAAACCCUCUCAAUCCAUAUGGA   1373

2.0 Zea mays full-length cDNA clone ZM_BFb0324P02 mRNA, complete cds NA coding protein psRNATarget
NM_001327795.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |*||*|||=*||||||||||||||
targets:1226   UAAAACCCUCUCAAUCCAUAUGGA   1249

2.0 Zea mays peroxisomal 2,4-dienoyl-CoA reductase-like (LOC103504713), mRNA NA coding protein psRNATarget
EU959771.1
ncRNA:24   AGUUAGGGGUAGUUAGGUAUACCU   1
  |*||*|||=*||||||||||||||
targets:1305   UAAAACCCUCUCAAUCCAUAUGGA   1328

2.0 Zea mays clone 219936 mRNA sequence NA coding protein psRNATarget
© 2017 OPP-ncRBASE. All rights reserved.