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BaseInfo

ncRNA ID osa-miR810a
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UCAUAAGCCCACCACAUGUGG - NA
Stem-loop(if miRNA) AAUAUUC   A      C    A     C                        AAUA                             C                             -   U
       ACU UGGUUG CAUC UAAGC CACCACAUGUGGCUCGCAUGCUUA    ACUAACGGCAUAAUUAGAUCACUUGAUGA GACGUAUAUCGGUGUUCGCUAUAUAUACU AUC A
       ||| |||||| |||| ||||| ||||||||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
       UGA ACCAGC GUAG AUUCG GUGGUGUACACCGAGCGUACGAAU    UGAUUGCCGUAUUAAUUUAGUGAACUACU CUGCGUAUAGCCACAAGCGAUAUAUAUGA UGG C
--UUGUU   C      A    C     A                        ----                             A                             A   U
Stem-loop sequence AAUAUUCACUAUGGUUGCCAUCAUAAGCCCACCACAUGUGGCUCGCAUGCUUAAAUAACUAACGGCAUAAUUAGAUCACUUGAUGACGACGUAUAUCGGUGUUCGCUAUAUAUACUAUCUACUGGUAAGUAUAUAUAGCGAACACCGAUAUGCGUCAUCAUCAAGUGAUUUAAUUAUGCCGUUAGUUAAGCAUGCGAGCCACAUGUGGUGAGCUUACGAUGACGACCACAGUUUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT834298.1
ncRNA:21   GGUGUACACCACCCGAAUACU   1
  ||||||||||||*||||||||
targets:542   CCACAUGUGGUGAGCUUAUGA   562

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA003J10, full insert sequence NA coding protein psRNATarget

Reference

1 PMID:16959252
"Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development";
Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH;
FEBS Lett. 580:5111-5116(2006).