| ncRNA ID | novel_zma_miR3966 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr1:24142113-24142322 [-] |
| Reference genome | RefGen_v4 |
| Source | SRR2287159 |
| Length | 23 |
| Mature sequence(if miRNA) | 188 - UGCUCUUUGGUCAGGCGCGGACA - 210 |
| Stem-loop(if miRNA) |
--U UG U G A C G A - G CGACCU G G CAGU ----- - - G AC A GCUCUU G CA GCGCGGAC GUCCG G C UAGGGC CGGAC GUCCG G CGU AGGCGG GCUC UCUG GUCAGG CGUGGAC GUCC GGC C |||||| | || |||||||| ||||| | | |||||| ||||| ||||| | ||| |||||| |||| |||| |||||| ||||||| |||| ||| A CGGGGA C GU CGCGCCUG CAGGC C G AUCCCG GCCUG CAGGC C GCA UCCGUC UGGG GGAC CGGUCC GCGCCUG CAGG CCG G CGG UG - G G - G G C G ------ G G -CCU CUCAA G A G -- G |
| Stem-loop sequence | UGCUCUUUGGUCAGGCGCGGACAGUCCGCGGCAUAGGGCCGGACGGUCCGCGACCUGGCGUGAGGCGGCAGUGCUCUCUGGUCAGGCGUGGACGGUCCACGGCACAGGGCCGGACGGUCCGCGACCUGGCGCAGGAACUCGGGUUCCCUGCCUGACGGCCGGACGGUCCGCGCCCUAGGGCCGGACGGUCCGCGCGUGCGUAGGGGCGGC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EZ096610.1 |
|
2.5 | TSA: Zea mays contig32265, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
| XM_008664822.2 |
|
3.0 | PREDICTED: Zea mays Stress responsive protein (LOC103641473), mRNA | NA | coding protein | psRNATarget |