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BaseInfo

ncRNA ID novel_zma_miR3964
Species Zea mays
Class miRNA
Genome position Chr1:48593543-48593616 [-]
Reference genome RefGen_v4
Source SRR2287159
Length 23
Mature sequence(if miRNA) 1 - GACUAAUAAAAAGAAACGGAGGA - 23
Stem-loop(if miRNA) --                                  A
  CUCCGUUUCUUUUUAUUAGUCGCUGGAUAGUGUA U
  ||||||||||||||||||||||||||||||||||
  GAGGCAAAGAAAAAUAAUCAGCGACCUAUCACGU U
AG                                  U
Stem-loop sequence CUCCGUUUCUUUUUAUUAGUCGCUGGAUAGUGUAAUUUUGCACUAUCCAGCGACUAAUAAAAAGAAACGGAGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008658752.2
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||||||
targets:2048   CCCUCCGUUUCUUUUUAUUAGUC   2070

0.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020542418.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||||||
targets:1981   CCCUCCGUUUCUUUUUAUUAGUC   2003

0.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008656936.2
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||||||
targets:168   CCCUCCGUUUCUUUUUAUUAGUC   190

0.0 PREDICTED: Zea mays putative HLH DNA-binding domain superfamily protein (LOC100381500), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008669400.2
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||||||
targets:1604   CCCUCCGUUUCUUUUUAUUAGUC   1626

0.0 PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA NA coding protein psRNATarget
BT024153.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||||||
targets:194   CCCUCCGUUUCUUUUUAUUAGUC   216

0.0 Zea mays clone EL01N0438E01 mRNA sequence NA coding protein psRNATarget
EZ061772.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||||||
targets:188   CCCUCCGUUUCUUUUUAUUAGUC   210

0.0 TSA: Zea mays contig62894, mRNA sequence NA coding protein psRNATarget
EU973473.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||||||
targets:653   CCCUCCGUUUCUUUUUAUUAGUC   675

0.0 Zea mays clone 399411 mRNA sequence NA coding protein psRNATarget
JB166285.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||||||
targets:4   CCCUCCGUUUCUUUUUAUUAGUC   26

0.0 Sequence 3949 from Patent EP2559767 NA coding protein psRNATarget
HI405830.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||||||
targets:4   CCCUCCGUUUCUUUUUAUUAGUC   26

0.0 Sequence 3955 from Patent EP2074227 NA coding protein psRNATarget
JB166291.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||||||
targets:4   CCCUCCGUUUCUUUUUAUUAGUC   26

0.0 Sequence 3955 from Patent EP2559767 NA coding protein psRNATarget
HI405824.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||||||
targets:4   CCCUCCGUUUCUUUUUAUUAGUC   26

0.0 Sequence 3949 from Patent EP2074227 NA coding protein psRNATarget
LQ237954.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||||||
targets:4   CCCUCCGUUUCUUUUUAUUAGUC   26

0.0 Sequence 3949 from Patent EP2985353 NA coding protein psRNATarget
LQ237960.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||||||
targets:4   CCCUCCGUUUCUUUUUAUUAGUC   26

0.0 Sequence 3955 from Patent EP2985353 NA coding protein psRNATarget
XM_020544902.1
ncRNA:23   AGG-AGGCAAAGAAAAAUAAUCAG   1
  |||-||||||||||||||||||||
targets:3153   UCCAUCCGUUUCUUUUUAUUAGUC   3176

0.0 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020544903.1
ncRNA:23   AGG-AGGCAAAGAAAAAUAAUCAG   1
  |||-||||||||||||||||||||
targets:3144   UCCAUCCGUUUCUUUUUAUUAGUC   3167

0.0 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008675770.2
ncRNA:23   AG-GAGGCAAAGAAAAAUAAUCAG   1
  ||-|||||||||||||||||||||
targets:1811   UCACUCCGUUUCUUUUUAUUAGUC   1834

0.0 PREDICTED: Zea mays pectinesterase-like (LOC103650113), mRNA NA coding protein psRNATarget
BT037092.1
ncRNA:23   AGG-AGGCAAAGAAAAAUAAUCAG   1
  |||-||||||||||||||||||||
targets:1087   UCCAUCCGUUUCUUUUUAUUAGUC   1110

0.0 Zea mays full-length cDNA clone ZM_BFb0154F16 mRNA, complete cds NA coding protein psRNATarget
NM_001143050.1
ncRNA:23   AGG-AGGCAAAGAAAAAUAAUCAG   1
  |||-||||||||||||||||||||
targets:1087   UCCAUCCGUUUCUUUUUAUUAGUC   1110

0.0 Zea mays uncharacterized LOC100216637 (LOC100216637), mRNA NA coding protein psRNATarget
JB166321.1
ncRNA:23   AG-GAGGCAAAGAAAAAUAAUCAG   1
  ||-|||||||||||||||||||||
targets:8   UCUCUCCGUUUCUUUUUAUUAGUC   31

0.0 Sequence 3985 from Patent EP2559767 NA coding protein psRNATarget
HI405860.1
ncRNA:23   AG-GAGGCAAAGAAAAAUAAUCAG   1
  ||-|||||||||||||||||||||
targets:8   UCUCUCCGUUUCUUUUUAUUAGUC   31

0.0 Sequence 3985 from Patent EP2074227 NA coding protein psRNATarget
LQ237990.1
ncRNA:23   AG-GAGGCAAAGAAAAAUAAUCAG   1
  ||-|||||||||||||||||||||
targets:8   UCUCUCCGUUUCUUUUUAUUAGUC   31

0.0 Sequence 3985 from Patent EP2985353 NA coding protein psRNATarget
HI405828.1
ncRNA:23   AG-GAGGCAAAGAAAAAUAAUCAG   1
  ||-|||||||||||||||||||||
targets:3   UCUCUCCGUUUCUUUUUAUUAGUC   26

0.0 Sequence 3953 from Patent EP2074227 NA coding protein psRNATarget
LQ237958.1
ncRNA:23   AG-GAGGCAAAGAAAAAUAAUCAG   1
  ||-|||||||||||||||||||||
targets:3   UCUCUCCGUUUCUUUUUAUUAGUC   26

0.0 Sequence 3953 from Patent EP2985353 NA coding protein psRNATarget
JB166289.1
ncRNA:23   AG-GAGGCAAAGAAAAAUAAUCAG   1
  ||-|||||||||||||||||||||
targets:3   UCUCUCCGUUUCUUUUUAUUAGUC   26

0.0 Sequence 3953 from Patent EP2559767 NA coding protein psRNATarget
XM_008664460.2
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||=|||||||||||||||||
targets:117   CCCUCUGUUUCUUUUUAUUAGUC   139

1.0 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA NA coding protein psRNATarget
EU970288.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *|||=||||||||||||||||||
targets:1335   CCCUUCGUUUCUUUUUAUUAGUC   1357

1.0 Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds NA coding protein psRNATarget
BT070166.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *|||||||||=||||||||||||
targets:768   CCCUCCGUUUUUUUUUAUUAGUC   790

1.5 Zea mays full-length cDNA clone ZM_BFc0141C23 mRNA, complete cds NA coding protein psRNATarget
NM_001328133.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *|||||||||=||||||||||||
targets:768   CCCUCCGUUUUUUUUUAUUAGUC   790

1.5 Zea mays Methionyl-tRNA synthetase (LOC100384454), mRNA NA coding protein psRNATarget
XM_008664463.2
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||=|||||||||||||||||
targets:97   CCCUCUGUUUCUUUUUAUUAGUC   119

1.0 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008651543.2
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  |||||||||||||||||||*|||
targets:2500   UCCUCCGUUUCUUUUUAUUUGUC   2522

1.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008651544.2
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  |||||||||||||||||||*|||
targets:1359   UCCUCCGUUUCUUUUUAUUUGUC   1381

1.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
JB163826.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  |||||||||||||||||||||
targets:1   CUCCGUUUCUUUUUAUUAGUC   21

0.0 Sequence 1490 from Patent EP2559767 NA coding protein psRNATarget
HI403365.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  |||||||||||||||||||||
targets:1   CUCCGUUUCUUUUUAUUAGUC   21

0.0 Sequence 1490 from Patent EP2074227 NA coding protein psRNATarget
LQ235495.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  |||||||||||||||||||||
targets:1   CUCCGUUUCUUUUUAUUAGUC   21

0.0 Sequence 1490 from Patent EP2985353 NA coding protein psRNATarget
HI403385.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  |||||||||||||||||||||
targets:1   CUCCGUUUCUUUUUAUUAGUC   21

0.0 Sequence 1510 from Patent EP2074227 NA coding protein psRNATarget
HI403367.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  |||||||||||||||||||||
targets:1   CUCCGUUUCUUUUUAUUAGUC   21

0.0 Sequence 1492 from Patent EP2074227 NA coding protein psRNATarget
JB163846.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  |||||||||||||||||||||
targets:1   CUCCGUUUCUUUUUAUUAGUC   21

0.0 Sequence 1510 from Patent EP2559767 NA coding protein psRNATarget
LQ235515.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  |||||||||||||||||||||
targets:1   CUCCGUUUCUUUUUAUUAGUC   21

0.0 Sequence 1510 from Patent EP2985353 NA coding protein psRNATarget
LQ235503.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  |||||||||||||||||||||
targets:1   CUCCGUUUCUUUUUAUUAGUC   21

0.0 Sequence 1498 from Patent EP2985353 NA coding protein psRNATarget
HI403373.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  |||||||||||||||||||||
targets:1   CUCCGUUUCUUUUUAUUAGUC   21

0.0 Sequence 1498 from Patent EP2074227 NA coding protein psRNATarget
JB163834.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  |||||||||||||||||||||
targets:1   CUCCGUUUCUUUUUAUUAGUC   21

0.0 Sequence 1498 from Patent EP2559767 NA coding protein psRNATarget
JB163828.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  |||||||||||||||||||||
targets:1   CUCCGUUUCUUUUUAUUAGUC   21

0.0 Sequence 1492 from Patent EP2559767 NA coding protein psRNATarget
LQ235497.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  |||||||||||||||||||||
targets:1   CUCCGUUUCUUUUUAUUAGUC   21

0.0 Sequence 1492 from Patent EP2985353 NA coding protein psRNATarget
HI403267.1
ncRNA:23   AGGAGGCAAAGAAAAA-UAAUCAG   1
  *|||||||||||||||-|||||||
targets:104   CCCUCCGUUUCUUUUUUAUUAGUC   127

3.0 Sequence 1392 from Patent EP2074227 NA coding protein psRNATarget
JB163728.1
ncRNA:23   AGGAGGCAAAGAAAAA-UAAUCAG   1
  *|||||||||||||||-|||||||
targets:104   CCCUCCGUUUCUUUUUUAUUAGUC   127

3.0 Sequence 1392 from Patent EP2559767 NA coding protein psRNATarget
LQ235397.1
ncRNA:23   AGGAGGCAAAGAAAAA-UAAUCAG   1
  *|||||||||||||||-|||||||
targets:104   CCCUCCGUUUCUUUUUUAUUAGUC   127

3.0 Sequence 1392 from Patent EP2985353 NA coding protein psRNATarget
XM_020546613.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:3702   CCCUCCGUUUCUUUUUAUUUGUC   3724

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:2923   CCCUCCGUUUCUUUUUAUUUGUC   2945

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:2817   CCCUCCGUUUCUUUUUAUUUGUC   2839

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546615.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:2800   CCCUCCGUUUCUUUUUAUUUGUC   2822

1.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546173.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:1467   CCCUCCGUUUCUUUUUAUUUGUC   1489

1.5 PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA NA coding protein psRNATarget
XM_020544250.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:2439   CCCUCCGUUUCUUUUUAUUUGUC   2461

1.5 PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001148943.2
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:1547   CCCUCCGUUUCUUUUUAUUUGUC   1569

1.5 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
XM_008677073.2
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:1531   CCCUCCGUUUCUUUUUAUUUGUC   1553

1.5 PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA NA coding protein psRNATarget
XM_008671992.2
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:1276   CCCUCCGUUUCUUUUUAUUUGUC   1298

1.5 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008647346.2
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:145   CCCUCCGUUUCUUUUUAUUUGUC   167

1.5 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
NM_001156655.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:1292   CCCUCCGUUUCUUUUUAUUUGUC   1314

1.5 Zea mays wax synthase (LOC100283756), mRNA NA coding protein psRNATarget
EU965844.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:1292   CCCUCCGUUUCUUUUUAUUUGUC   1314

1.5 Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds NA coding protein psRNATarget
XM_008671993.2
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:1170   CCCUCCGUUUCUUUUUAUUUGUC   1192

1.5 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
BT060817.2
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:234   CCCUCCGUUUCUUUUUAUUUGUC   256

1.5 Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds NA coding protein psRNATarget
EU974849.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:573   CCCUCCGUUUCUUUUUAUUUGUC   595

1.5 Zea mays clone 459794 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
NM_001151882.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:573   CCCUCCGUUUCUUUUUAUUUGUC   595

1.5 Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA NA coding protein psRNATarget
EU964901.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:501   CCCUCCGUUUCUUUUUAUUUGUC   523

1.5 Zea mays clone 282450 mRNA sequence NA coding protein psRNATarget
JB163817.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:15   CCCUCCGUUUCUUUUUAUUUGUC   37

1.5 Sequence 1481 from Patent EP2559767 NA coding protein psRNATarget
HI403279.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:15   CCCUCCGUUUCUUUUUAUUUGUC   37

1.5 Sequence 1404 from Patent EP2074227 NA coding protein psRNATarget
HI403356.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:15   CCCUCCGUUUCUUUUUAUUUGUC   37

1.5 Sequence 1481 from Patent EP2074227 NA coding protein psRNATarget
LQ235486.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:15   CCCUCCGUUUCUUUUUAUUUGUC   37

1.5 Sequence 1481 from Patent EP2985353 NA coding protein psRNATarget
LQ235409.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:15   CCCUCCGUUUCUUUUUAUUUGUC   37

1.5 Sequence 1404 from Patent EP2985353 NA coding protein psRNATarget
LQ235499.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:15   CCCUCCGUUUCUUUUUAUUUGUC   37

1.5 Sequence 1494 from Patent EP2985353 NA coding protein psRNATarget
HI403369.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:15   CCCUCCGUUUCUUUUUAUUUGUC   37

1.5 Sequence 1494 from Patent EP2074227 NA coding protein psRNATarget
JB163740.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:15   CCCUCCGUUUCUUUUUAUUUGUC   37

1.5 Sequence 1404 from Patent EP2559767 NA coding protein psRNATarget
JB163830.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:15   CCCUCCGUUUCUUUUUAUUUGUC   37

1.5 Sequence 1494 from Patent EP2559767 NA coding protein psRNATarget
LQ235424.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:15   CCCUCCGUUUCUUUUUAUUUGUC   37

1.5 Sequence 1419 from Patent EP2985353 NA coding protein psRNATarget
HI403294.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:15   CCCUCCGUUUCUUUUUAUUUGUC   37

1.5 Sequence 1419 from Patent EP2074227 NA coding protein psRNATarget
JB163755.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:15   CCCUCCGUUUCUUUUUAUUUGUC   37

1.5 Sequence 1419 from Patent EP2559767 NA coding protein psRNATarget
JB169171.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 6835 from Patent EP2559767 NA coding protein psRNATarget
JB169079.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 6743 from Patent EP2559767 NA coding protein psRNATarget
JB170077.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 7741 from Patent EP2559767 NA coding protein psRNATarget
HI409961.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 8086 from Patent EP2074227 NA coding protein psRNATarget
LQ241458.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 7453 from Patent EP2985353 NA coding protein psRNATarget
HI409616.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 7741 from Patent EP2074227 NA coding protein psRNATarget
JB169406.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 7070 from Patent EP2559767 NA coding protein psRNATarget
LQ241075.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 7070 from Patent EP2985353 NA coding protein psRNATarget
HI409328.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 7453 from Patent EP2074227 NA coding protein psRNATarget
JB170160.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 7824 from Patent EP2559767 NA coding protein psRNATarget
LQ242326.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 8321 from Patent EP2985353 NA coding protein psRNATarget
LQ240748.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 6743 from Patent EP2985353 NA coding protein psRNATarget
HI410196.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 8321 from Patent EP2074227 NA coding protein psRNATarget
HI408570.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 6695 from Patent EP2074227 NA coding protein psRNATarget
JB169789.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 7453 from Patent EP2559767 NA coding protein psRNATarget
LQ242091.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 8086 from Patent EP2985353 NA coding protein psRNATarget
HI408618.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 6743 from Patent EP2074227 NA coding protein psRNATarget
LQ241746.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 7741 from Patent EP2985353 NA coding protein psRNATarget
HI408710.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 6835 from Patent EP2074227 NA coding protein psRNATarget
HI409699.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 7824 from Patent EP2074227 NA coding protein psRNATarget
JB170657.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 8321 from Patent EP2559767 NA coding protein psRNATarget
LQ241829.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 7824 from Patent EP2985353 NA coding protein psRNATarget
JB169031.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 6695 from Patent EP2559767 NA coding protein psRNATarget
JB170422.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 8086 from Patent EP2559767 NA coding protein psRNATarget
HI408945.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 7070 from Patent EP2074227 NA coding protein psRNATarget
LQ240700.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 6695 from Patent EP2985353 NA coding protein psRNATarget
LQ240840.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 6835 from Patent EP2985353 NA coding protein psRNATarget
LQ241745.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 7740 from Patent EP2985353 NA coding protein psRNATarget
HI409615.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 7740 from Patent EP2074227 NA coding protein psRNATarget
JB170076.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*|||
targets:8   CCCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 7740 from Patent EP2559767 NA coding protein psRNATarget
HI403374.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  ||||||||||||||||||||*
targets:1   CUCCGUUUCUUUUUAUUAGUA   21

1.0 Sequence 1499 from Patent EP2074227 NA coding protein psRNATarget
LQ235504.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  ||||||||||||||||||||*
targets:1   CUCCGUUUCUUUUUAUUAGUA   21

1.0 Sequence 1499 from Patent EP2985353 NA coding protein psRNATarget
JB163835.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  ||||||||||||||||||||*
targets:1   CUCCGUUUCUUUUUAUUAGUA   21

1.0 Sequence 1499 from Patent EP2559767 NA coding protein psRNATarget
LQ241729.1
ncRNA:23   AG-GAGGCAAAGAAAAAUAAUCAG   1
  ||-|||||||||||||||||*|||
targets:7   UCUCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 7724 from Patent EP2985353 NA coding protein psRNATarget
HI409599.1
ncRNA:23   AG-GAGGCAAAGAAAAAUAAUCAG   1
  ||-|||||||||||||||||*|||
targets:7   UCUCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 7724 from Patent EP2074227 NA coding protein psRNATarget
JB170060.1
ncRNA:23   AG-GAGGCAAAGAAAAAUAAUCAG   1
  ||-|||||||||||||||||*|||
targets:7   UCUCUCCGUUUCUUUUUAUUUGUC   30

1.5 Sequence 7724 from Patent EP2559767 NA coding protein psRNATarget
LQ240984.1
ncRNA:23   AG-GAGGCAAAGAAAAAUAAUCAG   1
  ||-|||||||||||||||||*|||
targets:4   UCUCUCCGUUUCUUUUUAUUUGUC   27

1.5 Sequence 6979 from Patent EP2985353 NA coding protein psRNATarget
JB169315.1
ncRNA:23   AG-GAGGCAAAGAAAAAUAAUCAG   1
  ||-|||||||||||||||||*|||
targets:4   UCUCUCCGUUUCUUUUUAUUUGUC   27

1.5 Sequence 6979 from Patent EP2559767 NA coding protein psRNATarget
HI408854.1
ncRNA:23   AG-GAGGCAAAGAAAAAUAAUCAG   1
  ||-|||||||||||||||||*|||
targets:4   UCUCUCCGUUUCUUUUUAUUUGUC   27

1.5 Sequence 6979 from Patent EP2074227 NA coding protein psRNATarget
EU957018.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||=|||||||||||||*|||
targets:2004   CCCUCUGUUUCUUUUUAUUUGUC   2026

2.5 Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds NA coding protein psRNATarget
XM_008656166.2
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||=|||||||||||||*|||
targets:1270   CCCUCUGUUUCUUUUUAUUUGUC   1292

2.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001138729.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||=|||||||||||||*|||
targets:1406   CCCUCUGUUUCUUUUUAUUUGUC   1428

2.5 Zea mays uncharacterized LOC100193630 (LOC100193630), mRNA NA coding protein psRNATarget
BT035950.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||=|||||||||||||*|||
targets:1406   CCCUCUGUUUCUUUUUAUUUGUC   1428

2.5 Zea mays full-length cDNA clone ZM_BFb0089G20 mRNA, complete cds NA coding protein psRNATarget
XM_008656167.2
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||=|||||||||||||*|||
targets:1225   CCCUCUGUUUCUUUUUAUUUGUC   1247

2.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X2, mRNA NA coding protein psRNATarget
BT088158.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||=|||||||||||||*|||
targets:1206   CCCUCUGUUUCUUUUUAUUUGUC   1228

2.5 Zea mays full-length cDNA clone ZM_BFc0038O11 mRNA, complete cds NA coding protein psRNATarget
EU973028.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||=|||||||||||||*|||
targets:1172   CCCUCUGUUUCUUUUUAUUUGUC   1194

2.5 Zea mays clone 391970 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU956063.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||=|||||||||||||*|||
targets:1066   CCCUCUGUUUCUUUUUAUUUGUC   1088

2.5 Zea mays clone 1556707 mRNA sequence NA coding protein psRNATarget
BT068381.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||=|||||||||||||*|||
targets:1113   CCCUCUGUUUCUUUUUAUUUGUC   1135

2.5 Zea mays full-length cDNA clone ZM_BFb0135M15 mRNA, complete cds NA coding protein psRNATarget
EU952863.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*||=
targets:560   CCCUCCGUUUCUUUUUAUUUGUU   582

2.5 Zea mays clone 1291487 oleosin 16 kDa mRNA, complete cds NA coding protein psRNATarget
EU976836.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*||=
targets:558   CCCUCCGUUUCUUUUUAUUUGUU   580

2.5 Zea mays clone 991472 oleosin 16 kDa mRNA, complete cds NA coding protein psRNATarget
EU952246.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*||=
targets:559   CCCUCCGUUUCUUUUUAUUUGUU   581

2.5 Zea mays clone 1272655 oleosin 16 kDa mRNA, complete cds NA coding protein psRNATarget
NM_001349993.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*||=
targets:559   CCCUCCGUUUCUUUUUAUUUGUU   581

2.5 Zea mays oleosin 16 kDa (oleosin), mRNA NA coding protein psRNATarget
EU968632.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*||=
targets:562   CCCUCCGUUUCUUUUUAUUUGUU   584

2.5 Zea mays clone 322947 oleosin 16 kDa mRNA, complete cds NA coding protein psRNATarget
EU975941.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*||=
targets:553   CCCUCCGUUUCUUUUUAUUUGUU   575

2.5 Zea mays clone 506054 oleosin 16 kDa mRNA, complete cds NA coding protein psRNATarget
EU943455.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||||||||||||||||*||=
targets:193   CCCUCCGUUUCUUUUUAUUUGUU   215

2.5 Zea mays clone 1624294 mRNA sequence NA coding protein psRNATarget
HI410015.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||=|||||||||||||*|||
targets:8   CCCUCUGUUUCUUUUUAUUUGUC   30

2.5 Sequence 8140 from Patent EP2074227 NA coding protein psRNATarget
LQ242145.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||=|||||||||||||*|||
targets:8   CCCUCUGUUUCUUUUUAUUUGUC   30

2.5 Sequence 8140 from Patent EP2985353 NA coding protein psRNATarget
JB170476.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||=|||||||||||||*|||
targets:8   CCCUCUGUUUCUUUUUAUUUGUC   30

2.5 Sequence 8140 from Patent EP2559767 NA coding protein psRNATarget
HI409094.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||=|||||||||||||*|||
targets:5   CCCUCUGUUUCUUUUUAUUUGUC   27

2.5 Sequence 7219 from Patent EP2074227 NA coding protein psRNATarget
LQ241224.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||=|||||||||||||*|||
targets:5   CCCUCUGUUUCUUUUUAUUUGUC   27

2.5 Sequence 7219 from Patent EP2985353 NA coding protein psRNATarget
JB169555.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  *||||=|||||||||||||*|||
targets:5   CCCUCUGUUUCUUUUUAUUUGUC   27

2.5 Sequence 7219 from Patent EP2559767 NA coding protein psRNATarget
JB166303.1
ncRNA:23   AG-GAGGCAAAGAAAAAUAAUCAG   1
  ||-|||||||||||||||||||**
targets:3   UCUCUCCGUUUCUUUUUAUUAGCG   26

2.5 Sequence 3967 from Patent EP2559767 NA coding protein psRNATarget
HI405842.1
ncRNA:23   AG-GAGGCAAAGAAAAAUAAUCAG   1
  ||-|||||||||||||||||||**
targets:3   UCUCUCCGUUUCUUUUUAUUAGCG   26

2.5 Sequence 3967 from Patent EP2074227 NA coding protein psRNATarget
LQ237972.1
ncRNA:23   AG-GAGGCAAAGAAAAAUAAUCAG   1
  ||-|||||||||||||||||||**
targets:3   UCUCUCCGUUUCUUUUUAUUAGCG   26

2.5 Sequence 3967 from Patent EP2985353 NA coding protein psRNATarget
BT088136.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  |*|||||||||||||||||*|||
targets:776   UACUCCGUUUCUUUUUAUUUGUC   798

1.5 Zea mays full-length cDNA clone ZM_BFc0030P23 mRNA, complete cds NA coding protein psRNATarget
NM_001196908.1
ncRNA:23   AGGAGGCAAAGAAAAAUAAUCAG   1
  |*|||||||||||||||||*|||
targets:776   UACUCCGUUUCUUUUUAUUUGUC   798

1.5 Zea mays uncharacterized LOC100502430 (LOC100502430), mRNA NA coding protein psRNATarget
JB163774.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  ||||*||||||||||||||||
targets:1   CUCCAUUUCUUUUUAUUAGUC   21

1.0 Sequence 1438 from Patent EP2559767 NA coding protein psRNATarget
LQ235443.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  ||||*||||||||||||||||
targets:1   CUCCAUUUCUUUUUAUUAGUC   21

1.0 Sequence 1438 from Patent EP2985353 NA coding protein psRNATarget
HI403313.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  ||||*||||||||||||||||
targets:1   CUCCAUUUCUUUUUAUUAGUC   21

1.0 Sequence 1438 from Patent EP2074227 NA coding protein psRNATarget
LQ235469.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  ||||*||||||||||||||||
targets:1   CUCCAUUUCUUUUUAUUAGUC   21

1.0 Sequence 1464 from Patent EP2985353 NA coding protein psRNATarget
JB163800.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  ||||*||||||||||||||||
targets:1   CUCCAUUUCUUUUUAUUAGUC   21

1.0 Sequence 1464 from Patent EP2559767 NA coding protein psRNATarget
HI403339.1
ncRNA:21   GAGGCAAAGAAAAAUAAUCAG   1
  ||||*||||||||||||||||
targets:1   CUCCAUUUCUUUUUAUUAGUC   21

1.0 Sequence 1464 from Patent EP2074227 NA coding protein psRNATarget