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BaseInfo

ncRNA ID	novel_zma_miR3963
Species	Zea mays
Class	miRNA
Genome position	Chr1:259396787-259396871 [-]
Reference genome	RefGen_v4
Source	SRR1583944
Length	24
Mature sequence(if miRNA)	1 - GUGUUCAGCACUCGGUAAAGAGGC - 24
Stem-loop(if miRNA)	-  -              U           ---A  --     UU  CC CUUUGCCGAGUGUU GACACUCGGCA    AC  CAUUC  U  || |||||||||||||| |||||||||||    ||  |||||  GG GAAAUGGCUCACGA UUGUGAGCCGU    UG  GUGAG  G C  A              C           GUCC  CC     CC
Stem-loop sequence	CCCUUUGCCGAGUGUUUGACACUCGGCAAACCAUUCUUUGCCGAGUGCCGUCCUGUGCCGAGUGUUCAGCACUCGGUAAAGAGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT067215.1	ncRNA:24   CGGAGAAAUGGCUCACGACUUGUG   1   **=*||||=|||||*||||||||| targets:1239   CGUGCUUUGCCGAGGGCUGAACAC   1262 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0310H18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175109.1	ncRNA:24   CGGAGAAAUGGCUCACGACUUGUG   1   **=*||||=|||||*||||||||| targets:1376   CGUGCUUUGCCGAGGGCUGAACAC   1399 Target Full Sequence	2.5	Zea mays 1-aminocyclopropane-1-carboxylate oxidase2 (cl955_1), mRNA	NA	coding protein	psRNATarget
BT064046.1	ncRNA:24   CGGAGAAAUGGCUCACGACUUGUG   1   **=*||||=|||||*||||||||| targets:1376   CGUGCUUUGCCGAGGGCUGAACAC   1399 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0133L10 mRNA, complete cds	NA	coding protein	psRNATarget