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BaseInfo

ncRNA ID	novel_zma_miR3955
Species	Zea mays
Class	miRNA
Genome position	Chr1:176020323-176020438 [-]
Reference genome	RefGen_v4
Source	SRR2287159;SRR2089700
Length	24
Mature sequence(if miRNA)	93 - AGGGGCGGACUGUCCGCGGCCUGA - 116
Stem-loop(if miRNA)	--AG G            C G   GA   -     G    GC    U GUG  C   UA  A     G GCGGACUGUCCG G CCU  GGC CGGAC GUCC  GGCC G   CG GGC  GG C     | |||||||||||| | |||  ||| ||||| ||||  |||| |   || |||  ||     C CGCCUGGCAGGC C GGG  CCG GCCUG CAGG  CCGG C   GU CCG  UC U CAUG G            - G   UC   C     G    --    - --A  -   UC  U
Stem-loop sequence	AGGGGCGGACUGUCCGCGGCCUGAGGCCGGACGGUCCGCGGCCUGGUGCGCGGCUAGGACUUCUCUGCCUGACGGCCGGACGGUCCGCGCCCUGGGGCCGGACGGUCCGCGCGUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001196968.1	ncRNA:24   AGUCCGGCGCCUGUCAGGCGGGGA   1   |||||||||||||||||||||||| targets:1265   UCAGGCCGCGGACAGUCCGCCCCU   1288 Target Full Sequence	0.0	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
BT088349.1	ncRNA:24   AGUCCGGCGCCUGUCAGGCGGGGA   1   |||||||||||||||||||||||| targets:1265   UCAGGCCGCGGACAGUCCGCCCCU   1288 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020539115.1	ncRNA:24   AGUCCGGCGCCUGUCAGGCGGGGA   1   *||||||||||||||||||||||| targets:2708   CCAGGCCGCGGACAGUCCGCCCCU   2731 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA	NA	coding protein	psRNATarget