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BaseInfo

ncRNA ID novel_zma_miR3952
Species Zea mays
Class miRNA
Genome position Chr1:196523632-196523722 [-]
Reference genome RefGen_v4
Source SRR2287159
Length 24
Mature sequence(if miRNA) 1 - UAGGCAAAGUGUGGCAAGUUAUGU - 24
Stem-loop(if miRNA) --C     AC               -------------        CG   G
   UAACU  GCCACACUUUGCCUA             AGGUUAGU  UUC A
   |||||  |||||||||||||||             ||||||||  ||| A
   AUUGA  CGGUGUGAAACGGAU             UCCAAUCA  AAG U
UGU     -A               UGAAAAGACGGAU        AG   U
Stem-loop sequence CUAACUACGCCACACUUUGCCUAAGGUUAGUCGUUCGAAUUGAAGAACUAACCUUAGGCAGAAAAGUUAGGCAAAGUGUGGCAAGUUAUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI403392.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*|||||||||||||||||||||
targets:20   GCCUAACUUGCCACACUUUGCCUA   43

0.0 Sequence 1517 from Patent EP2074227 NA coding protein psRNATarget
LQ235522.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*|||||||||||||||||||||
targets:20   GCCUAACUUGCCACACUUUGCCUA   43

0.0 Sequence 1517 from Patent EP2985353 NA coding protein psRNATarget
JB163853.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*|||||||||||||||||||||
targets:20   GCCUAACUUGCCACACUUUGCCUA   43

0.0 Sequence 1517 from Patent EP2559767 NA coding protein psRNATarget
BT033837.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*|||||||||||||||||||||
targets:932   GCCUAACUUGCCACACUUUGCCUA   955

0.0 Zea mays full-length cDNA clone ZM_BFc0155O23 mRNA, complete cds NA coding protein psRNATarget
NM_001149797.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  ||*|||||||=|||||||||||||
targets:934   ACCUAACUUGUCACACUUUGCCUA   957

1.0 Zea mays CASP-like protein Os12g0568700 (LOC103650532), mRNA NA coding protein psRNATarget
EU958119.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  ||*|||||||=|||||||||||||
targets:934   ACCUAACUUGUCACACUUUGCCUA   957

1.0 Zea mays clone 1674247 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
NM_001137099.2
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*|||||||||||||||||||||
targets:1420   GCCUAACUUGCCACACUUUGCCUA   1443

0.0 Zea mays KDEL-tailed cysteine endopeptidase CEP1 (cl903_-1), mRNA NA coding protein psRNATarget
AY109437.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*|||||||||||||||||||||
targets:1430   GCCUAACUUGCCACACUUUGCCUA   1453

0.0 Zea mays CL903_-1 mRNA sequence NA coding protein psRNATarget
BT018862.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*|||||||||||||||||||||
targets:1050   GCCUAACUUGCCACACUUUGCCUA   1073

0.0 Zea mays clone EL01N0559E06.d mRNA sequence NA coding protein psRNATarget
XM_008660313.2
ncRNA:24   UGU--AUUGAACGGUGUGAAACGGAU   1
  |==--|||||||||||||||||||||
targets:709   AUGGCUAACUUGCCACACUUUGCCUA   734

0.0 PREDICTED: Zea mays uncharacterized LOC100280373 (LOC100280373), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008660311.2
ncRNA:24   UGU--AUUGAACGGUGUGAAACGGAU   1
  |==--|||||||||||||||||||||
targets:709   AUGGCUAACUUGCCACACUUUGCCUA   734

0.0 PREDICTED: Zea mays uncharacterized LOC100280373 (LOC100280373), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008660309.2
ncRNA:24   UGU--AUUGAACGGUGUGAAACGGAU   1
  |==--|||||||||||||||||||||
targets:709   AUGGCUAACUUGCCACACUUUGCCUA   734

0.0 PREDICTED: Zea mays uncharacterized LOC100280373 (LOC100280373), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008670840.2
ncRNA:24   UGU--AUUGAACGGUGUGAAACGGAU   1
  |==--|||||||||||||||||||||
targets:2674   AUGGCUAACUUGCCACACUUUGCCUA   2699

0.0 PREDICTED: Zea mays ARM repeat superfamily protein (LOC103646122), transcript variant X1, mRNA NA coding protein psRNATarget
JB163747.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*|||||||=|||||||||||||
targets:20   GCCUAACUUGUCACACUUUGCCUA   43

1.0 Sequence 1411 from Patent EP2559767 NA coding protein psRNATarget
LQ235416.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*|||||||=|||||||||||||
targets:20   GCCUAACUUGUCACACUUUGCCUA   43

1.0 Sequence 1411 from Patent EP2985353 NA coding protein psRNATarget
HI403286.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*|||||||=|||||||||||||
targets:20   GCCUAACUUGUCACACUUUGCCUA   43

1.0 Sequence 1411 from Patent EP2074227 NA coding protein psRNATarget
JB163753.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*||||||||||||||||||||=
targets:20   GCUUAACUUGCCACACUUUGCCUG   43

1.0 Sequence 1417 from Patent EP2559767 NA coding protein psRNATarget
HI403292.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*||||||||||||||||||||=
targets:20   GCUUAACUUGCCACACUUUGCCUG   43

1.0 Sequence 1417 from Patent EP2074227 NA coding protein psRNATarget
LQ235422.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*||||||||||||||||||||=
targets:20   GCUUAACUUGCCACACUUUGCCUG   43

1.0 Sequence 1417 from Patent EP2985353 NA coding protein psRNATarget
EZ060318.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  ||*|||||||=||=||||||||||
targets:156   ACCUAACUUGUCAUACUUUGCCUA   179

2.5 TSA: Zea mays contig61440, mRNA sequence NA coding protein psRNATarget
AY108857.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  ||*|||||||=||=||||||||||
targets:336   ACCUAACUUGUCAUACUUUGCCUA   359

2.5 Zea mays PCO060055 mRNA sequence NA coding protein psRNATarget
BT083952.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  ==*|||||||||||||||||||||
targets:1485   GUCUAACUUGCCACACUUUGCCUA   1508

0.0 Zea mays full-length cDNA clone ZM_BFb0057K24 mRNA, complete cds NA coding protein psRNATarget
XM_020540795.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*||||||||||||=||||||||
targets:694   GCCUAACUUGCCACAUUUUGCCUA   717

1.5 PREDICTED: Zea mays BTB/POZ domain-containing protein NPY1 (LOC103632767), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008660020.2
ncRNA:24   UGUA--UUGAACGGUGUGAAACGGAU   1
  |==|--||||||||||||||||=|||
targets:3007   AUGUCUAACUUGCCACACUUUGUCUA   3032

1.5 PREDICTED: Zea mays THO complex subunit 4B (si946052g10b), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008660021.2
ncRNA:24   UGUA--UUGAACGGUGUGAAACGGAU   1
  |==|--||||||||||||||||=|||
targets:3135   AUGUCUAACUUGCCACACUUUGUCUA   3160

1.5 PREDICTED: Zea mays THO complex subunit 4B (si946052g10b), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020543539.1
ncRNA:24   UGUA--UUGAACGGUGUGAAACGGAU   1
  |==|--||||||||||||||||=|||
targets:3142   AUGUCUAACUUGCCACACUUUGUCUA   3167

1.5 PREDICTED: Zea mays THO complex subunit 4B (si946052g10b), transcript variant X6, mRNA NA coding protein psRNATarget
AY109434.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*|||*|||||||||||||||||
targets:400   GCCUAAGUUGCCACACUUUGCCUA   423

1.0 Zea mays CL2997_-2 mRNA sequence NA coding protein psRNATarget
EU968686.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*||||||||||||||||*||||
targets:624   GCCUAACUUGCCACACUUUACCUA   647

1.5 Zea mays clone 323451 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT065161.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*||||||||||||||||*||||
targets:607   GCCUAACUUGCCACACUUUACCUA   630

1.5 Zea mays full-length cDNA clone ZM_BFb0009L23 mRNA, complete cds NA coding protein psRNATarget
XM_020550436.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*||||||||||||||||*||||
targets:642   GCCUAACUUGCCACACUUUACCUA   665

1.5 PREDICTED: Zea mays 14 kDa zinc-binding protein-like (LOC100277449), mRNA NA coding protein psRNATarget
XM_008681572.2
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*||||||*||||||||||||||
targets:2404   GCCUAACUUACCACACUUUGCCUA   2427

1.0 PREDICTED: Zea mays uncharacterized LOC103654747 (LOC103654747), mRNA NA coding protein psRNATarget
EZ061854.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:52   GGCUAACUGUGCCACACUUUGCCUA   76

2.0 TSA: Zea mays contig62976, mRNA sequence NA coding protein psRNATarget
JB163900.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1564 from Patent EP2559767 NA coding protein psRNATarget
LQ235569.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1564 from Patent EP2985353 NA coding protein psRNATarget
HI403439.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1564 from Patent EP2074227 NA coding protein psRNATarget
JB163758.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1422 from Patent EP2559767 NA coding protein psRNATarget
LQ235427.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1422 from Patent EP2985353 NA coding protein psRNATarget
JB163720.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1384 from Patent EP2559767 NA coding protein psRNATarget
LQ235390.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1385 from Patent EP2985353 NA coding protein psRNATarget
HI403358.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1483 from Patent EP2074227 NA coding protein psRNATarget
JB163819.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1483 from Patent EP2559767 NA coding protein psRNATarget
HI403260.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1385 from Patent EP2074227 NA coding protein psRNATarget
JB163717.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1381 from Patent EP2559767 NA coding protein psRNATarget
LQ235386.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1381 from Patent EP2985353 NA coding protein psRNATarget
LQ235488.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1483 from Patent EP2985353 NA coding protein psRNATarget
HI403256.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1381 from Patent EP2074227 NA coding protein psRNATarget
HI403258.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1383 from Patent EP2074227 NA coding protein psRNATarget
HI403425.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1550 from Patent EP2074227 NA coding protein psRNATarget
LQ235555.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1550 from Patent EP2985353 NA coding protein psRNATarget
JB163656.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1320 from Patent EP2559767 NA coding protein psRNATarget
LQ235389.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1384 from Patent EP2985353 NA coding protein psRNATarget
LQ235325.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1320 from Patent EP2985353 NA coding protein psRNATarget
HI403255.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1380 from Patent EP2074227 NA coding protein psRNATarget
JB163718.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1382 from Patent EP2559767 NA coding protein psRNATarget
JB163719.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1383 from Patent EP2559767 NA coding protein psRNATarget
HI403259.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1384 from Patent EP2074227 NA coding protein psRNATarget
LQ235385.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1380 from Patent EP2985353 NA coding protein psRNATarget
HI403195.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1320 from Patent EP2074227 NA coding protein psRNATarget
JB163886.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1550 from Patent EP2559767 NA coding protein psRNATarget
HI403297.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1422 from Patent EP2074227 NA coding protein psRNATarget
LQ235388.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1383 from Patent EP2985353 NA coding protein psRNATarget
JB163721.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1385 from Patent EP2559767 NA coding protein psRNATarget
LQ235387.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1382 from Patent EP2985353 NA coding protein psRNATarget
JB163716.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1380 from Patent EP2559767 NA coding protein psRNATarget
HI403257.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:19   GGCUAACUGUGCCACACUUUGCCUA   43

2.0 Sequence 1382 from Patent EP2074227 NA coding protein psRNATarget
EZ517203.1
ncRNA:24   UGUAUUGA-ACGGUGUGAAACGGAU   1
  =**|||||-||||||||||||||||
targets:100   GGCUAACUAUGCCACACUUUGCCUA   124

2.0 TSA: Zea mays cultivar W22 CL614Contig1.betc, mRNA sequence NA coding protein psRNATarget
HI406697.1
ncRNA:24   UGUA---UUGAACGGUGUGAAACGGAU   1
  ==||---||=*||||||||||||||||
targets:6   GUAUCUAAAUGUGCCACACUUUGCCUA   32

2.0 Sequence 4822 from Patent EP2074227 NA coding protein psRNATarget
JB167158.1
ncRNA:24   UGUA---UUGAACGGUGUGAAACGGAU   1
  ==||---||=*||||||||||||||||
targets:6   GUAUCUAAAUGUGCCACACUUUGCCUA   32

2.0 Sequence 4822 from Patent EP2559767 NA coding protein psRNATarget
LQ238827.1
ncRNA:24   UGUA---UUGAACGGUGUGAAACGGAU   1
  ==||---||=*||||||||||||||||
targets:6   GUAUCUAAAUGUGCCACACUUUGCCUA   32

2.0 Sequence 4822 from Patent EP2985353 NA coding protein psRNATarget
JB163829.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  ==*||||||*=|||||||||||||
targets:20   GUCUAACUUAUCACACUUUGCCUA   43

2.0 Sequence 1493 from Patent EP2559767 NA coding protein psRNATarget
HI403368.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  ==*||||||*=|||||||||||||
targets:20   GUCUAACUUAUCACACUUUGCCUA   43

2.0 Sequence 1493 from Patent EP2074227 NA coding protein psRNATarget
LQ235498.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  ==*||||||*=|||||||||||||
targets:20   GUCUAACUUAUCACACUUUGCCUA   43

2.0 Sequence 1493 from Patent EP2985353 NA coding protein psRNATarget
NM_001328519.1
ncRNA:24   UGU--AUUGA-ACGGUGUGAAACGGAU   1
  ||=--|||||-||*|||||||||||||
targets:432   ACGGCUAACUGUGACACACUUUGCCUA   458

3.0 Zea mays hypothetical protein (pco113764), mRNA NA coding protein psRNATarget
EU959044.1
ncRNA:24   UGU--AUUGA-ACGGUGUGAAACGGAU   1
  ||=--|||||-||*|||||||||||||
targets:419   ACGGCUAACUGUGACACACUUUGCCUA   445

3.0 Zea mays clone 209607 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
XM_020541995.1
ncRNA:24   UGU--AUUGA-ACGGUGUGAAACGGAU   1
  ||=--|||||-||*|||||||||||||
targets:433   ACGGCUAACUGUGACACACUUUGCCUA   459

3.0 PREDICTED: Zea mays hypothetical protein (pco113764), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001177034.1
ncRNA:24   UGUA---UUGAACGGUGUGAAACGGAU   1
  ==||---||=*||||||||||||||||
targets:536   GUAUCUAAAUGUGCCACACUUUGCCUA   562

2.0 Zea mays putative LRR receptor-like serine/threonine-protein kinase (LOC100384510), mRNA NA coding protein psRNATarget
BT083538.1
ncRNA:24   UGUA---UUGAACGGUGUGAAACGGAU   1
  ==||---||=*||||||||||||||||
targets:536   GUAUCUAAAUGUGCCACACUUUGCCUA   562

2.0 Zea mays full-length cDNA clone ZM_BFb0009D08 mRNA, complete cds NA coding protein psRNATarget
BT064583.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  ||*|*|*|||||||||||||||||
targets:1648   ACCUCAGUUGCCACACUUUGCCUA   1671

1.0 Zea mays full-length cDNA clone ZM_BFc0185L15 mRNA, complete cds NA coding protein psRNATarget
EU960971.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  ||*|*|*|||||||||||||||||
targets:1718   ACCUCAGUUGCCACACUUUGCCUA   1741

1.0 Zea mays clone 230073 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
NM_001150092.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  ||*|*|*|||||||||||||||||
targets:1718   ACCUCAGUUGCCACACUUUGCCUA   1741

1.0 Zea mays uncharacterized LOC100276261 (LOC100276261), mRNA NA coding protein psRNATarget
XM_008645942.2
ncRNA:24   UGUA---UUGAACGGUGUGAAACGGAU   1
  ==||---||=*||||||||||||||||
targets:3174   GUAUCUAAAUGUGCCACACUUUGCCUA   3200

2.0 PREDICTED: Zea mays putative LRR receptor-like serine/threonine-protein kinase (LOC100384510), transcript variant X1, mRNA NA coding protein psRNATarget
EZ086875.1
ncRNA:24   UGUA-----UUGAACGGUGUGAAACGGAU   1
  ||||-----|||||*||||||||||*|||
targets:27   ACAUGUCCUAACUUACCACACUUUGACUA   55

2.5 TSA: Zea mays contig22521, mRNA sequence NA coding protein psRNATarget
EZ066409.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*|||*||||||||||||*||||
targets:8   GCCUAAGUUGCCACACUUUACCUA   31

2.5 TSA: Zea mays contig02043, mRNA sequence NA coding protein psRNATarget
EU945170.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*|*|*|||||||||||||||||
targets:856   GCCUCAGUUGCCACACUUUGCCUA   879

1.0 Zea mays clone 243250 mRNA sequence NA coding protein psRNATarget
XM_008654136.2
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  ||*|*|*||||||||=||||||||
targets:1323   ACCUCAAUUGCCACAUUUUGCCUA   1346

2.5 PREDICTED: Zea mays clathrin light chain 3 (LOC103632305), mRNA NA coding protein psRNATarget
EU966347.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  =|*|*|*|||||||||||||||||
targets:1340   GCCUCAGUUGCCACACUUUGCCUA   1363

1.0 Zea mays clone 293813 strictosidine synthase 1 precursor, mRNA, complete cds NA coding protein psRNATarget
XM_020543351.1
ncRNA:24   UGUAUUGAACGGUGUGAAACGGAU   1
  ||*|*|*|||||||||||||=|||
targets:799   ACCUCAAUUGCCACACUUUGUCUA   822

2.5 PREDICTED: Zea mays uncharacterized LOC109941998 (LOC109941998), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020553369.1
ncRNA:24   UGUAUUGAA-CGGUGUGAAACGGAU   1
  =**|||||*-|||||||||||||||
targets:89   GGCUAACUGCGCCACACUUUGCCUA   113

3.0 PREDICTED: Zea mays gamma-secretase subunit APH-1B (LOC100283316), transcript variant X1, mRNA NA coding protein psRNATarget
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