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BaseInfo

ncRNA ID	novel_zma_miR3951
Species	Zea mays
Class	miRNA
Genome position	Chr1:203252296-203252383 [-]
Reference genome	RefGen_v4
Source	SRR2287159
Length	24
Mature sequence(if miRNA)	65 - ACUGGAAAUGAUUAGAAGGACUAA - 88
Stem-loop(if miRNA)	--  UG  AAU       AG          -  AUC        A   AC  GA   GAUUAGA  GACUAAAAUC UC   CUUAUUUA U   ||  ||   |||||||  |||||||||| ||   ||||||||   UG  CU   CUAAUCU  CUGAUUUUAG AG   GAAUAAGU U UU  GU  GCC       CU          C  -AA        U
Stem-loop sequence	ACUGGAAAUGAUUAGAAGGACUAAAAUCUCAUCCUUAUUUAAUUUUGAAUAAGAAGACGAUUUUAGUCUCUCUAAUCCCGUCUGGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT037090.1	ncRNA:24   AAUCAGGAAGAUUAGUAAAGGUCA   1   ||--||=|||||||=||||||||| targets:1418   UU--UCUUUCUAAUUAUUUCCAGU   1439 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0154E01 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001143048.1	ncRNA:24   AAUCAGGAAGAUUAGUAAAGGUCA   1   ||--||=|||||||=||||||||| targets:1418   UU--UCUUUCUAAUUAUUUCCAGU   1439 Target Full Sequence	2.5	Zea mays putative protein kinase superfamily protein (LOC100216635), mRNA	NA	coding protein	psRNATarget
EU965977.1	ncRNA:24   AAUC------AGGAAGAUUAGUAAAGGUCA   1   *|||------||=|*||||||||||||||* targets:801   AUAGAAUAACUCUUGCUAAUCAUUUCCAGA   830 Target Full Sequence	3.0	Zea mays clone 290514 nucleoside diphosphate kinase 2 mRNA, complete cds	NA	coding protein	psRNATarget
EU968148.1	ncRNA:24   AAUC------AGGAAGAUUAGUAAAGGUCA   1   *|||------||=|*||||||||||||||* targets:577   AUAGAAUAACUCUUGCUAAUCAUUUCCAGA   606 Target Full Sequence	3.0	Zea mays clone 315446 mRNA sequence	NA	coding protein	psRNATarget