ncRNA ID | novel_zma_miR3948 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:216165674-216165743 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287159;SRR2287162 |
Length | 24 |
Mature sequence(if miRNA) | 47 - GUAUUGGAUGGGAUUGAGCCGGUU - 70 |
Stem-loop(if miRNA) |
--       A          -CC     A    CA   GUAUUGG UGGGAUUGAG   GGUUU AAUU  U   ||||||| ||||||||||   ||||| ||||  A   CAUAACC ACCUUAACUC   UUAAA UUGA  A CA       C          CAC     A    AC |
Stem-loop sequence | GUAUUGGAUGGGAUUGAGCCGGUUUAAAUUCAUAACAAGUUAAAAUUCACCUCAAUUCCACCCAAUACAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008660051.2 |
|
1.0 | PREDICTED: Zea mays putative MADS-box transcription factor family protein (MADS71), transcript variant X1, mRNA | NA | coding protein | psRNATarget |