ncRNA ID | novel_zma_miR3944 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:225027518-225027689 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287159;SRR1618882;SRR2287163;SRR1618883;SRR3341856;SRR5099742;SRR5100248;SRR5100255;SRR5105961;SRR5105963 |
Length | 23 |
Mature sequence(if miRNA) | 1 - CAUGCUAACACUGAACAUUUUAG - 23 |
Stem-loop(if miRNA) |
--AGGAA       -UC      ----U   -UUCU      -     GC  G GGAUCUACACCAUCAAAUUUCGACUGUGACUAUGCUU        GUUCAGU   AGUAUG     CAU     UUGGAU AUCAG  UC A                                     A        |||||||   ||||||     |||     |||||| |||||  || |        CAAGUCA   UCGUAC     GUA     AGCCUA UAGUC  UU G                                     U GAUUUUA       CAA      UUAUU   UUCCU      G     --  - UAAGUCAAAAGGUUUUAGAGUCACUUUAUCAUGAGUG |
Stem-loop sequence | AGGAAGUUCAGUUCAGUAUGUCAUUUCUUUGGAUAUCAGGCUCGAGGAUCUACACCAUCAAAUUUCGACUGUGACUAUGCUUAUGUGAGUACUAUUUCACUGAGAUUUUGGAAAACUGAAUGUUCUGAUGAUCCGAUCCUUAUGUUAUUCAUGCUAACACUGAACAUUUUAG |