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BaseInfo

ncRNA ID	ath-miRf10047-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - GGUGGUGUCGAUCGACACCAUC - NA
Stem-loop(if miRNA)	-                 G  G                 GG GUGG GGUGUCGAUCGACACUG UG UGGUGUCAAUCGACACU  U |||| ||||||||||||||||| || ||||||||||||||||| CGCU CCACAGCUAGCUGUGGU GU GUCAUAGUUAGCUGUGG  G     A                 G  G                 UG
Stem-loop sequence	GUGGGGUGUCGAUCGACACUGGUGGUGGUGUCAAUCGACACUGGUGGUGGUGUCGAUUGAUACUGGUGGUGGUGUCGAUCGACACCAUCGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ069810.1	ncRNA:22   CUACCACAGCUAGCUGUGGUGG   1   **||||||||||||||||||=| targets:208   CUUGGUGUCGAUCGACACCAUC   229 Target Full Sequence	1.5	Arabidopsis thaliana At2g13270 mRNA, partial sequence	NA	coding protein	psRNATarget
AK230046.1	ncRNA:22   CUACCACAGCUAGCUGUGGUGG   1   **|||||||||*|||||||||| targets:3   AUUGGUGUCGAACGACACCACC   24 Target Full Sequence	1.5	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-63-D12	NA	coding protein	psRNATarget
DQ069800.1	ncRNA:22   CUACCACAGCUAGCUGUGGUGG   1   |**||||||||*|||||||||| targets:1962   GUGGGUGUCGAACGACACCACC   1983 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g10070) mRNA, complete cds	NA	coding protein	psRNATarget
EF183309.1	ncRNA:22   CUACCACAGCUAGCUGUGGUGG   1   *|||||*||||||||||||||= targets:1352   CAUGGUAUCGAUCGACACCACU   1373 Target Full Sequence	2.0	Arabidopsis thaliana clone asmbl_5245 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183308.1	ncRNA:22   CUACCACAGCUAGCUGUGGUGG   1   *|||||*||||||||||||||= targets:1260   CAUGGUAUCGAUCGACACCACU   1281 Target Full Sequence	2.0	Arabidopsis thaliana clone asmbl_5244 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069810.1	ncRNA:22   CUACCACAGCUAGCUGUGGUGG   1   |||*|||||||*|||||||||| targets:312   GAUAGUGUCGACCGACACCACC   333 Target Full Sequence	2.5	Arabidopsis thaliana At2g13270 mRNA, partial sequence	NA	coding protein	psRNATarget
NM_147252.2	ncRNA:22   CUACCACAGCUAGCUGUGGUGG   1   **||||||||||||||||||*= targets:436   CCUGGUGUCGAUCGACACCAGU   457 Target Full Sequence	2.5	Arabidopsis thaliana transmembrane protein mRNA	transmembrane protein(AT2G06095)	coding protein	psRNATarget
AY219108.1	ncRNA:22   CUACCACAGCUAGCUGUGGUGG   1   **||||||||||||||||||*= targets:398   CCUGGUGUCGAUCGACACCAGU   419 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g06095/F5K7.25) mRNA, complete cds	NA	coding protein	psRNATarget
JA894865.1	ncRNA:22   CUACCACAGCUAGCUGUGGUGG   1   **||||||||||||||||||*= targets:81   CUUGGUGUCGAUCGACACCAGU   102 Target Full Sequence	2.5	Sequence 182 from Patent WO2011067745	NA	coding protein	psRNATarget