ncRNA ID | novel_zma_miR3923 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:48457038-48457118 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287159 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CUGGCCGACGGGAAUUACUAA - 21 |
Stem-loop(if miRNA) |
--                          G         CA   CUGGCCGACGGGAAUUACUAAUUAAU CCCGUCGGC  G   |||||||||||||||||||||||||| |||||||||  G   GACCGGCUGCCCUUAAUGAUUAAUUA GGGCAGCCG  U UG                          A         AC |
Stem-loop sequence | CUGGCCGACGGGAAUUACUAAUUAAUGCCCGUCGGCCAGGUCAGCCGACGGGAAUUAAUUAGUAAUUCCCGUCGGCCAGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008682205.1 |
|
3.0 | PREDICTED: Zea mays proline-rich receptor-like protein kinase PERK2 (LOC103655449), mRNA | NA | coding protein | psRNATarget |