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BaseInfo

ncRNA ID novel_zma_miR3923
Species Zea mays
Class miRNA
Genome position Chr9:48457038-48457118 [+]
Reference genome RefGen_v4
Source SRR2287159
Length 21
Mature sequence(if miRNA) 1 - CUGGCCGACGGGAAUUACUAA - 21
Stem-loop(if miRNA) --                          G         CA
  CUGGCCGACGGGAAUUACUAAUUAAU CCCGUCGGC  G
  |||||||||||||||||||||||||| |||||||||  G
  GACCGGCUGCCCUUAAUGAUUAAUUA GGGCAGCCG  U
UG                          A         AC
Stem-loop sequence CUGGCCGACGGGAAUUACUAAUUAAUGCCCGUCGGCCAGGUCAGCCGACGGGAAUUAAUUAGUAAUUCCCGUCGGCCAGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008682205.1
ncRNA:21   AAU-CAUUAAGGGCAGCCGGUC   1
  |||-||||*|||||||||||||
targets:6   UUAUGUAACUCCCGUCGGCCAG   27

3.0 PREDICTED: Zea mays proline-rich receptor-like protein kinase PERK2 (LOC103655449), mRNA NA coding protein psRNATarget