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BaseInfo

ncRNA ID novel_zma_miR3918
Species Zea mays
Class miRNA
Genome position Chr9:48457033-48457113 [-]
Reference genome RefGen_v4
Source SRR2287159
Length 21
Mature sequence(if miRNA) 61 - CUGGCCGACGGGAAUUACUAA - 81
Stem-loop(if miRNA) --                          U          G
  CUGGCCGACGGGAAUUACUAAUUAAU CCCGUCGGCU A
  |||||||||||||||||||||||||| |||||||||| C
  GACCGGCUGCCCUUAAUGAUUAAUUA GGGCAGCCGG C
UG                          C          U
Stem-loop sequence CUGGCCGACGGGAAUUACUAAUUAAUUCCCGUCGGCUGACCUGGCCGACGGGCAUUAAUUAGUAAUUCCCGUCGGCCAGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008682205.1
ncRNA:21   AAU-CAUUAAGGGCAGCCGGUC   1
  |||-||||*|||||||||||||
targets:6   UUAUGUAACUCCCGUCGGCCAG   27

3.0 PREDICTED: Zea mays proline-rich receptor-like protein kinase PERK2 (LOC103655449), mRNA NA coding protein psRNATarget