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BaseInfo

ncRNA ID novel_zma_miR3909
Species Zea mays
Class miRNA
Genome position Chr8:126987693-126987755 [+]
Reference genome RefGen_v4
Source SRR2287159
Length 24
Mature sequence(if miRNA) 1 - UCUCUGCGGAGGCGUGGACGGUCC - 24
Stem-loop(if miRNA) --    U  GG   -       G  CCG    A
  UCUC GC  AGG CGUGGAC GU   CGGC C
  |||| ||  ||| ||||||| ||   |||| A
  AGAG UG  UCC GUGCCUG CA   GCCG G
CG    -  GG   A       A  --A    G
Stem-loop sequence UCUCUGCGGAGGCGUGGACGGUCCGCGGCACAGGGCCGAACAGUCCGUGACCUGGGUGAGAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT039435.1
ncRNA:24   CCUGGCAGGUGCGGAGGCGUCUCU   1
  |||||||||=||||||||||||||
targets:304   GGACCGUCCGCGCCUCCGCAGAGA   327

1.0 Zea mays full-length cDNA clone ZM_BFc0013G13 mRNA, complete cds NA coding protein psRNATarget