ncRNA ID | novel_zma_miR3901 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:106707340-106707441 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287159;SRR2287160;SRR2287161;SRR2287163 |
Length | 23 |
Mature sequence(if miRNA) | 80 - AUAGGAUGUUUCCACUGACGGUU - 102 |
Stem-loop(if miRNA) |
--                 A     AA  UAAGA                U   AUAGGAUGUUUCCACUG CGGUU  GU     CAACCGCUAGUGGAAA C   ||||||||||||||||| |||||  ||     ||||||||||||||||   UAUCCUACAAAGGUGAC GCCAA  CA     GUUGGCGGUCACUUUU A UU                 C     CA  UUGUG                A |
Stem-loop sequence | AUAGGAUGUUUCCACUGACGGUUAAGUUAAGACAACCGCUAGUGGAAAUCAAUUUUCACUGGCGGUUGGUGUUACACAACCGCCAGUGGAAACAUCCUAUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ101180.1 |
|
2.5 | TSA: Zea mays contig36836, mRNA sequence | NA | coding protein | psRNATarget |