ncRNA ID | novel_zma_miR3893 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:296929312-296929373 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 39 - CGCUAGUGGAAAUCGAUUUCCAUU - 62 |
Stem-loop(if miRNA) |
--  A                A     UUCU   UG AAAUCGAUUUCCAUUG CGGUU    U   || |||||||||||||||| |||||   AC UUUAGCUAAAGGUGAU GCUAA    A UU  C                C     CUCG |
Stem-loop sequence | UGAAAAUCGAUUUCCAUUGACGGUUUUCUUAGCUCAAUCGCUAGUGGAAAUCGAUUUCCAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU960305.1 |
|
1.5 | Zea mays clone 223391 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001150001.1 |
|
1.5 | Zea mays uncharacterized LOC100276144 (LOC100276144), mRNA | NA | coding protein | psRNATarget |