Search result

BaseInfo

ncRNA ID novel_zma_miR3891
Species Zea mays
Class miRNA
Genome position Chr1:176618167-176618242 [+]
Reference genome RefGen_v4
Source SRR2287159;SRR2287164;SRR2287165
Length 24
Mature sequence(if miRNA) 53 - GUUAAGUAACUUCCUAGAGCCGGU - 76
Stem-loop(if miRNA) CA    ----           A              UUGU
  GCCG    UAGGAAGUUAC UAACUUCCUAGAGU    A
  ||||    ||||||||||| ||||||||||||||
  UGGC    AUCCUUCAAUG AUUGAAGGAUCUCA    C
--    CGAG           A              UUUA
Stem-loop sequence CAGCCGUAGGAAGUUACAUAACUUCCUAGAGUUUGUACAUUUACUCUAGGAAGUUAAGUAACUUCCUAGAGCCGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU949881.1
ncRNA:24   UGGCCGAGAUCCUUCAAUGAAUUG   1
  |=***|||||||||||||||||||
targets:936   AUGUACUCUAGGAAGUUACUUAAC   959

0.0 Zea mays clone 450754 mRNA sequence NA coding protein psRNATarget