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BaseInfo

ncRNA ID novel_zma_miR3890
Species Zea mays
Class miRNA
Genome position Chr1:294821911-294822046 [+]
Reference genome RefGen_v4
Source SRR1583944;SRR2638137;SRR2647343;SRR2647385;SRR2647386;SRR2647387;SRR1583941
Length 22
Mature sequence(if miRNA) 1 - AUGUGUCUGGGAAGCGGUGCCU - 22
Stem-loop(if miRNA) --              C      U A       AAUU        ------AG       ----    ---U   U
  AUGUGUCUGGGAAG GGUGCC G UGAAGGU    UGGAAAGG        GGUGGUU    UGGG    AGU C
  |||||||||||||| |||||| | |||||||    ||||||||        |||||||    ||||    |||
  UAUGCAGACCUUUC UCAUGG C ACUUUUA    ACCUUUUC        CCGCCAG    ACCC    UCG C
CU              -      - -       CCUU        ACGAGAUA       AUGA    UCUU   G
Stem-loop sequence AUGUGUCUGGGAAGCGGUGCCUGAUGAAGGUAAUUUGGAAAGGAGGGUGGUUUGGGUAGUUCCGGCUUUCUCCCAAGUAGACCGCCAUAGAGCACUUUUCCAUUCCAUUUUCACGGUACUCUUUCCAGACGUAUUC