ncRNA ID | novel_zma_miR3890 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:294821911-294822046 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944;SRR2638137;SRR2647343;SRR2647385;SRR2647386;SRR2647387;SRR1583941 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AUGUGUCUGGGAAGCGGUGCCU - 22 |
Stem-loop(if miRNA) |
--              C      U A       AAUU        ------AG       ----    ---U   U   AUGUGUCUGGGAAG GGUGCC G UGAAGGU    UGGAAAGG        GGUGGUU    UGGG    AGU C   |||||||||||||| |||||| | |||||||    ||||||||        |||||||    ||||    |||   UAUGCAGACCUUUC UCAUGG C ACUUUUA    ACCUUUUC        CCGCCAG    ACCC    UCG C CU              -      - -       CCUU        ACGAGAUA       AUGA    UCUU   G |
Stem-loop sequence | AUGUGUCUGGGAAGCGGUGCCUGAUGAAGGUAAUUUGGAAAGGAGGGUGGUUUGGGUAGUUCCGGCUUUCUCCCAAGUAGACCGCCAUAGAGCACUUUUCCAUUCCAUUUUCACGGUACUCUUUCCAGACGUAUUC |