ncRNA ID | novel_zma_miR3877 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:167119662-167119757 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287159;SRR5100255 |
Length | 24 |
Mature sequence(if miRNA) | 73 - AGAAGCGCACAGAUGAAGUCGGGG - 96 |
Stem-loop(if miRNA) |
--      G   G                    G  G GG       U   CCGGCU CAU UGUGUGCUUCUCUUCUCUUA GU G  UGCUAAG G   |||||| ||| |||||||||||||||||||| || |  |||||||   GGCUGA GUA ACACGCGAAGAGAAGAGAAU CA U  AUGAUUC A GG      A   G                    A  G AG       U |
Stem-loop sequence | CCGGCUGCAUGUGUGUGCUUCUCUUCUCUUAGGUGGGGUGCUAAGUGAUCUUAGUAGAUGACAUAAGAGAAGAGAAGCGCACAGAUGAAGUCGGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020538582.1 |
|
2.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020538581.1 |
|
2.0 | PREDICTED: Zea mays B3 domain-containing protein Os02g0598200 (LOC103628738), transcript variant X1, mRNA | NA | coding protein | psRNATarget |