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BaseInfo

ncRNA ID	novel_zma_miR3873
Species	Zea mays
Class	miRNA
Genome position	Chr7:91458040-91458105 [-]
Reference genome	RefGen_v4
Source	SRR2287159
Length	24
Mature sequence(if miRNA)	1 - CUAGCGACAACUAAAACGAAACGG - 24
Stem-loop(if miRNA)	--A    U               U        A    UUUC UUUUAGUUGUCGCUG AUAGUGCA U    |||| ||||||||||||||| ||||||||    AAAG AAAAUCAACAGCGAU UAUCAUGU U GGC    C               C        U
Stem-loop sequence	AUUUCUUUUUAGUUGUCGCUGUAUAGUGCAAUUUUGUACUAUCUAGCGACAACUAAAACGAAACGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB169695.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:11   CCGUUUCGUUUUAGUUGUCGCUGG   34 Target Full Sequence	1.5	Sequence 7359 from Patent EP2559767	NA	coding protein	psRNATarget
HI409234.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:11   CCGUUUCGUUUUAGUUGUCGCUGG   34 Target Full Sequence	1.5	Sequence 7359 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241364.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:11   CCGUUUCGUUUUAGUUGUCGCUGG   34 Target Full Sequence	1.5	Sequence 7359 from Patent EP2985353	NA	coding protein	psRNATarget
HI407269.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:14   CCGUUUCGUUUUAGUUGUCGCUGG   37 Target Full Sequence	1.5	Sequence 5394 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239399.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:14   CCGUUUCGUUUUAGUUGUCGCUGG   37 Target Full Sequence	1.5	Sequence 5394 from Patent EP2985353	NA	coding protein	psRNATarget
JB167730.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:14   CCGUUUCGUUUUAGUUGUCGCUGG   37 Target Full Sequence	1.5	Sequence 5394 from Patent EP2559767	NA	coding protein	psRNATarget
JB167672.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:14   CCGUUUCGUUUUAGUUGUCGCUGG   37 Target Full Sequence	1.5	Sequence 5336 from Patent EP2559767	NA	coding protein	psRNATarget
HI407211.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:14   CCGUUUCGUUUUAGUUGUCGCUGG   37 Target Full Sequence	1.5	Sequence 5336 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239454.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:14   CCGUUUCGUUUUAGUUGUCGCUGG   37 Target Full Sequence	1.5	Sequence 5449 from Patent EP2985353	NA	coding protein	psRNATarget
HI407324.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:14   CCGUUUCGUUUUAGUUGUCGCUGG   37 Target Full Sequence	1.5	Sequence 5449 from Patent EP2074227	NA	coding protein	psRNATarget
JB167785.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:14   CCGUUUCGUUUUAGUUGUCGCUGG   37 Target Full Sequence	1.5	Sequence 5449 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239341.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:14   CCGUUUCGUUUUAGUUGUCGCUGG   37 Target Full Sequence	1.5	Sequence 5336 from Patent EP2985353	NA	coding protein	psRNATarget
HI407230.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:14   CCGUUUCGUUUUAGUUGUCGCUGG   37 Target Full Sequence	1.5	Sequence 5355 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239360.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:14   CCGUUUCGUUUUAGUUGUCGCUGG   37 Target Full Sequence	1.5	Sequence 5355 from Patent EP2985353	NA	coding protein	psRNATarget
HI407305.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:14   CCGUUUCGUUUUAGUUGUCGCUGG   37 Target Full Sequence	1.5	Sequence 5430 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239435.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:14   CCGUUUCGUUUUAGUUGUCGCUGG   37 Target Full Sequence	1.5	Sequence 5430 from Patent EP2985353	NA	coding protein	psRNATarget
JB167691.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:14   CCGUUUCGUUUUAGUUGUCGCUGG   37 Target Full Sequence	1.5	Sequence 5355 from Patent EP2559767	NA	coding protein	psRNATarget
JB167766.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:14   CCGUUUCGUUUUAGUUGUCGCUGG   37 Target Full Sequence	1.5	Sequence 5430 from Patent EP2559767	NA	coding protein	psRNATarget
EZ065373.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:286   CCGUUUCGUUUUAGUUGUCGCUGG   309 Target Full Sequence	1.5	TSA: Zea mays contig01006, mRNA sequence	NA	coding protein	psRNATarget
BT062468.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:579   CCGUUUCGUUUUAGUUGUCGCUGG   602 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001153043.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:843   CCGUUUCGUUUUAGUUGUCGCUGG   866 Target Full Sequence	1.5	Zea mays uncharacterized LOC100280105 (LOC100280105), mRNA	NA	coding protein	psRNATarget
BT055583.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:843   CCGUUUCGUUUUAGUUGUCGCUGG   866 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0049P16 mRNA, complete cds	NA	coding protein	psRNATarget
EU968044.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:1032   CCGUUUCGUUUUAGUUGUCGCUGG   1055 Target Full Sequence	1.5	Zea mays clone 313382 adenylyl-sulfate kinase 1 mRNA, complete cds	NA	coding protein	psRNATarget
BT035546.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:920   CCGUUUCGUUUUAGUUGUCGCUGG   943 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0068P01 mRNA, complete cds	NA	coding protein	psRNATarget
EU945792.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:1186   CCGUUUCGUUUUAGUUGUCGCUGG   1209 Target Full Sequence	1.5	Zea mays clone 285684 mRNA sequence	NA	coding protein	psRNATarget
EU971616.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:1170   CCGUUUCGUUUUAGUUGUCGCUGG   1193 Target Full Sequence	1.5	Zea mays clone 368130 rieske domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
EU964554.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:1335   CCGUUUCGUUUUAGUUGUCGCUGG   1358 Target Full Sequence	1.5	Zea mays clone 279840 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_020549872.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:1273   CCGUUUCGUUUUAGUUGUCGCUGG   1296 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100382893 (LOC100382893), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001175582.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:1440   CCGUUUCGUUUUAGUUGUCGCUGG   1463 Target Full Sequence	1.5	Zea mays uncharacterized LOC100382893 (LOC100382893), mRNA	NA	coding protein	psRNATarget
BT065656.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:1440   CCGUUUCGUUUUAGUUGUCGCUGG   1463 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0005B18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001156357.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:1523   CCGUUUCGUUUUAGUUGUCGCUGG   1546 Target Full Sequence	1.5	Zea mays Acetylornithine deacetylase (pco121857a), mRNA	NA	coding protein	psRNATarget
EU964807.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:1523   CCGUUUCGUUUUAGUUGUCGCUGG   1546 Target Full Sequence	1.5	Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds	NA	coding protein	psRNATarget
EU971439.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:2121   CCGUUUCGUUUUAGUUGUCGCUGG   2144 Target Full Sequence	1.5	Zea mays clone 364738 cyclin-like F-box mRNA, complete cds	NA	coding protein	psRNATarget
NM_001158152.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=| targets:2121   CCGUUUCGUUUUAGUUGUCGCUGG   2144 Target Full Sequence	1.5	Zea mays cyclin-like F-box (LOC100285258), mRNA	NA	coding protein	psRNATarget
HI409683.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||=|||||||||||||||=| targets:4   CCGUUUUGUUUUAGUUGUCGCUGG   27 Target Full Sequence	2.5	Sequence 7808 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241813.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||=|||||||||||||||=| targets:4   CCGUUUUGUUUUAGUUGUCGCUGG   27 Target Full Sequence	2.5	Sequence 7808 from Patent EP2985353	NA	coding protein	psRNATarget
JB170144.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||=|||||||||||||||=| targets:4   CCGUUUUGUUUUAGUUGUCGCUGG   27 Target Full Sequence	2.5	Sequence 7808 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242181.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   =|||||||||||||||||||||=| targets:9   UCGUUUCGUUUUAGUUGUCGCUGG   32 Target Full Sequence	1.5	Sequence 8176 from Patent EP2985353	NA	coding protein	psRNATarget
JB170512.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   =|||||||||||||||||||||=| targets:9   UCGUUUCGUUUUAGUUGUCGCUGG   32 Target Full Sequence	1.5	Sequence 8176 from Patent EP2559767	NA	coding protein	psRNATarget
HI410051.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   =|||||||||||||||||||||=| targets:9   UCGUUUCGUUUUAGUUGUCGCUGG   32 Target Full Sequence	1.5	Sequence 8176 from Patent EP2074227	NA	coding protein	psRNATarget
EU957761.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||=|||||||||||||||=| targets:300   CCGUUUUGUUUUAGUUGUCGCUGG   323 Target Full Sequence	2.5	Zea mays clone 1614826 mRNA sequence	NA	coding protein	psRNATarget
XM_020551485.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |=||||||||||||||||||||=| targets:2536   CUGUUUCGUUUUAGUUGUCGCUGG   2559 Target Full Sequence	1.5	PREDICTED: Zea mays putative cytochrome P450 superfamily protein (LOC100279319), transcript variant X1, mRNA	NA	coding protein	psRNATarget
HI406120.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=* targets:4   CCGUUUCGUUUUAGUUGUCGCUGA   27 Target Full Sequence	2.5	Sequence 4245 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238250.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=* targets:4   CCGUUUCGUUUUAGUUGUCGCUGA   27 Target Full Sequence	2.5	Sequence 4245 from Patent EP2985353	NA	coding protein	psRNATarget
JB166581.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=* targets:4   CCGUUUCGUUUUAGUUGUCGCUGA   27 Target Full Sequence	2.5	Sequence 4245 from Patent EP2559767	NA	coding protein	psRNATarget
XM_008667486.2	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||||||||||||||||||||=* targets:1341   CCGUUUCGUUUUAGUUGUCGCUGA   1364 Target Full Sequence	2.5	PREDICTED: Zea mays mannan endo-1,4-beta-mannosidase 3 (LOC103644285), transcript variant X1, mRNA	NA	coding protein	psRNATarget
HI403088.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:1   CCGUUUCUUUUUAGUUGUCGCUGG   24 Target Full Sequence	2.5	Sequence 1213 from Patent EP2074227	NA	coding protein	psRNATarget
JB163549.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:1   CCGUUUCUUUUUAGUUGUCGCUGG   24 Target Full Sequence	2.5	Sequence 1213 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235218.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:1   CCGUUUCUUUUUAGUUGUCGCUGG   24 Target Full Sequence	2.5	Sequence 1213 from Patent EP2985353	NA	coding protein	psRNATarget
LQ239359.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:13   CCGUUUCUUUUUAGUUGUCGCUGG   36 Target Full Sequence	2.5	Sequence 5354 from Patent EP2985353	NA	coding protein	psRNATarget
JB167690.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:13   CCGUUUCUUUUUAGUUGUCGCUGG   36 Target Full Sequence	2.5	Sequence 5354 from Patent EP2559767	NA	coding protein	psRNATarget
HI407229.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:13   CCGUUUCUUUUUAGUUGUCGCUGG   36 Target Full Sequence	2.5	Sequence 5354 from Patent EP2074227	NA	coding protein	psRNATarget
HI407270.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||=||| targets:14   CCGUUUCUUUUUAGUUGUCGUUAG   37 Target Full Sequence	2.5	Sequence 5395 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239400.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||=||| targets:14   CCGUUUCUUUUUAGUUGUCGUUAG   37 Target Full Sequence	2.5	Sequence 5395 from Patent EP2985353	NA	coding protein	psRNATarget
JB167731.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||=||| targets:14   CCGUUUCUUUUUAGUUGUCGUUAG   37 Target Full Sequence	2.5	Sequence 5395 from Patent EP2559767	NA	coding protein	psRNATarget
JB163748.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:19   CCGUUUCUUUUUAGUUGUCGCUGG   42 Target Full Sequence	2.5	Sequence 1412 from Patent EP2559767	NA	coding protein	psRNATarget
JB163860.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:19   CCGUUUCUUUUUAGUUGUCGCUGG   42 Target Full Sequence	2.5	Sequence 1524 from Patent EP2559767	NA	coding protein	psRNATarget
HI403287.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:19   CCGUUUCUUUUUAGUUGUCGCUGG   42 Target Full Sequence	2.5	Sequence 1412 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235529.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:19   CCGUUUCUUUUUAGUUGUCGCUGG   42 Target Full Sequence	2.5	Sequence 1524 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235417.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:19   CCGUUUCUUUUUAGUUGUCGCUGG   42 Target Full Sequence	2.5	Sequence 1412 from Patent EP2985353	NA	coding protein	psRNATarget
HI403399.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:19   CCGUUUCUUUUUAGUUGUCGCUGG   42 Target Full Sequence	2.5	Sequence 1524 from Patent EP2074227	NA	coding protein	psRNATarget
EU957363.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |=|||||*|||||||||||||||| targets:475   CUGUUUCUUUUUAGUUGUCGCUAG   498 Target Full Sequence	1.0	Zea mays clone 1589847 mRNA sequence	NA	coding protein	psRNATarget
EZ112557.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:56   CCGUUUCUUUUUAGUUGUCGCUGG   79 Target Full Sequence	2.5	TSA: Zea mays contig48218, mRNA sequence	NA	coding protein	psRNATarget
BT062074.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:1145   CCGUUUCUUUUUAGUUGUCGCUGG   1168 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0212O02 mRNA, complete cds	NA	coding protein	psRNATarget
EU953599.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:1233   CCGUUUCUUUUUAGUUGUCGCUGG   1256 Target Full Sequence	2.5	Zea mays clone 1437867 F-box domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008682276.2	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:1228   CCGUUUCUUUUUAGUUGUCGCUGG   1251 Target Full Sequence	2.5	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU973774.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:1243   CCGUUUCUUUUUAGUUGUCGCUGG   1266 Target Full Sequence	2.5	Zea mays clone 410704 F-box domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008682289.2	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:1257   CCGUUUCUUUUUAGUUGUCGCUGG   1280 Target Full Sequence	2.5	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X6, mRNA	NA	coding protein	psRNATarget
NM_001158647.2	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:1309   CCGUUUCUUUUUAGUUGUCGCUGG   1332 Target Full Sequence	2.5	Zea mays F-box domain containing protein (LOC100285757), mRNA	NA	coding protein	psRNATarget
EU973763.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:1311   CCGUUUCUUUUUAGUUGUCGCUGG   1334 Target Full Sequence	2.5	Zea mays clone 409560 F-box domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008682282.2	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:1417   CCGUUUCUUUUUAGUUGUCGCUGG   1440 Target Full Sequence	2.5	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008674191.2	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:1159   CCGUUUCUUUUUAGUUGUCGCUGG   1182 Target Full Sequence	2.5	PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020553332.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:2006   CCGUUUCUUUUUAGUUGUCGCUGG   2029 Target Full Sequence	2.5	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020553342.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:2037   CCGUUUCUUUUUAGUUGUCGCUGG   2060 Target Full Sequence	2.5	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_008677351.2	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:2065   CCGUUUCUUUUUAGUUGUCGCUGG   2088 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC103651662), mRNA	NA	coding protein	psRNATarget
XM_020553327.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:2119   CCGUUUCUUUUUAGUUGUCGCUGG   2142 Target Full Sequence	2.5	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020553339.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:2150   CCGUUUCUUUUUAGUUGUCGCUGG   2173 Target Full Sequence	2.5	PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020537567.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*||||||||||||||=| targets:1460   CCGUUUCUUUUUAGUUGUCGCUGG   1483 Target Full Sequence	2.5	PREDICTED: Zea mays MADS2 (zmm2), transcript variant X2, mRNA	NA	coding protein	psRNATarget
HI406357.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |=|||||*||||||||||||||=| targets:6   CUGUUUCUUUUUAGUUGUCGCUGG   29 Target Full Sequence	2.5	Sequence 4482 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238487.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |=|||||*||||||||||||||=| targets:6   CUGUUUCUUUUUAGUUGUCGCUGG   29 Target Full Sequence	2.5	Sequence 4482 from Patent EP2985353	NA	coding protein	psRNATarget
JB166818.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |=|||||*||||||||||||||=| targets:6   CUGUUUCUUUUUAGUUGUCGCUGG   29 Target Full Sequence	2.5	Sequence 4482 from Patent EP2559767	NA	coding protein	psRNATarget
NM_001352327.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |=|||||*||||||||||||||=| targets:2677   CUGUUUCUUUUUAGUUGUCGCUGG   2700 Target Full Sequence	2.5	Zea mays delta-1-pyrroline-5-carboxylate synthase-like (LOC103630430), mRNA	NA	coding protein	psRNATarget
JB169406.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*|||||*|||||||||| targets:12   CCGUUUCUUUUUAUUUGUCGCUAG   35 Target Full Sequence	2.5	Sequence 7070 from Patent EP2559767	NA	coding protein	psRNATarget
JB169079.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*|||||*|||||||||| targets:12   CCGUUUCUUUUUAUUUGUCGCUAG   35 Target Full Sequence	2.5	Sequence 6743 from Patent EP2559767	NA	coding protein	psRNATarget
HI408618.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*|||||*|||||||||| targets:12   CCGUUUCUUUUUAUUUGUCGCUAG   35 Target Full Sequence	2.5	Sequence 6743 from Patent EP2074227	NA	coding protein	psRNATarget
JB170422.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*|||||*|||||||||| targets:12   CCGUUUCUUUUUAUUUGUCGCUAG   35 Target Full Sequence	2.5	Sequence 8086 from Patent EP2559767	NA	coding protein	psRNATarget
HI408945.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*|||||*|||||||||| targets:12   CCGUUUCUUUUUAUUUGUCGCUAG   35 Target Full Sequence	2.5	Sequence 7070 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242091.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*|||||*|||||||||| targets:12   CCGUUUCUUUUUAUUUGUCGCUAG   35 Target Full Sequence	2.5	Sequence 8086 from Patent EP2985353	NA	coding protein	psRNATarget
LQ240748.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*|||||*|||||||||| targets:12   CCGUUUCUUUUUAUUUGUCGCUAG   35 Target Full Sequence	2.5	Sequence 6743 from Patent EP2985353	NA	coding protein	psRNATarget
HI409961.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*|||||*|||||||||| targets:12   CCGUUUCUUUUUAUUUGUCGCUAG   35 Target Full Sequence	2.5	Sequence 8086 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241075.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*|||||*|||||||||| targets:12   CCGUUUCUUUUUAUUUGUCGCUAG   35 Target Full Sequence	2.5	Sequence 7070 from Patent EP2985353	NA	coding protein	psRNATarget
JB166319.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||*||||*|||||||||||||||| targets:16   CCAUUUCUUUUUAGUUGUCGCUAG   39 Target Full Sequence	1.0	Sequence 3983 from Patent EP2559767	NA	coding protein	psRNATarget
HI405858.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||*||||*|||||||||||||||| targets:16   CCAUUUCUUUUUAGUUGUCGCUAG   39 Target Full Sequence	1.0	Sequence 3983 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237988.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||*||||*|||||||||||||||| targets:16   CCAUUUCUUUUUAGUUGUCGCUAG   39 Target Full Sequence	1.0	Sequence 3983 from Patent EP2985353	NA	coding protein	psRNATarget
EU964901.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*|||||*|||||||||| targets:505   CCGUUUCUUUUUAUUUGUCGCUAG   528 Target Full Sequence	2.5	Zea mays clone 282450 mRNA sequence	NA	coding protein	psRNATarget
EU974849.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*|||||*|||||||||| targets:577   CCGUUUCUUUUUAUUUGUCGCUAG   600 Target Full Sequence	2.5	Zea mays clone 459794 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001151882.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |||||||*|||||*|||||||||| targets:577   CCGUUUCUUUUUAUUUGUCGCUAG   600 Target Full Sequence	2.5	Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA	NA	coding protein	psRNATarget
NM_001305845.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||*||||*|||||||||||||||| targets:2228   CCAUUUCUUUUUAGUUGUCGCUAG   2251 Target Full Sequence	1.0	Zea mays uncharacterized LOC542022 (LOC542022), mRNA	NA	coding protein	psRNATarget
LQ235192.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||*||*||||||||||||||=| targets:1   CCGUCUCAUUUUAGUUGUCGCUGG   24 Target Full Sequence	2.5	Sequence 1187 from Patent EP2985353	NA	coding protein	psRNATarget
HI403062.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||*||*||||||||||||||=| targets:1   CCGUCUCAUUUUAGUUGUCGCUGG   24 Target Full Sequence	2.5	Sequence 1187 from Patent EP2074227	NA	coding protein	psRNATarget
JB163523.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   ||||*||*||||||||||||||=| targets:1   CCGUCUCAUUUUAGUUGUCGCUGG   24 Target Full Sequence	2.5	Sequence 1187 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238505.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |=*||||*|||||||||||||||| targets:3   CUAUUUCUUUUUAGUUGUCGCUAG   26 Target Full Sequence	1.0	Sequence 4500 from Patent EP2985353	NA	coding protein	psRNATarget
JB166836.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |=*||||*|||||||||||||||| targets:3   CUAUUUCUUUUUAGUUGUCGCUAG   26 Target Full Sequence	1.0	Sequence 4500 from Patent EP2559767	NA	coding protein	psRNATarget
HI406375.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |=*||||*|||||||||||||||| targets:3   CUAUUUCUUUUUAGUUGUCGCUAG   26 Target Full Sequence	1.0	Sequence 4500 from Patent EP2074227	NA	coding protein	psRNATarget
EU952581.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |=*||||*|||||||||||||||| targets:469   CUAUUUCUUUUUAGUUGUCGCUAG   492 Target Full Sequence	1.0	Zea mays clone 1283791 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001149050.1	ncRNA:24   GGCAAAGCAAAAUCAACAGCGAUC   1   |=*||||*|||||||||||||||| targets:469   CUAUUUCUUUUUAGUUGUCGCUAG   492 Target Full Sequence	1.0	Zea mays hypothetical protein (LOC100274760), mRNA	NA	coding protein	psRNATarget