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BaseInfo

ncRNA ID novel_zma_miR3869
Species Zea mays
Class miRNA
Genome position Chr7:167826176-167826253 [-]
Reference genome RefGen_v4
Source SRR2287159;SRR2287162;SRR2287163
Length 21
Mature sequence(if miRNA) 1 - AAUAAAAAGAAACGGAGGUAG - 21
Stem-loop(if miRNA) --C                                   A
   CCUCCGUUUCUUUUUAUUAGUCGCUGGAUAGUGUA U
   |||||||||||||||||||||||||||||||||||
   GGAGGCAAAGAAAAAUAAUCAGCGACCUAUCACGU U
GAU                                   U
Stem-loop sequence CCCUCCGUUUCUUUUUAUUAGUCGCUGGAUAGUGUAAUUUUGCACUAUCCAGCGACUAAUAAAAAGAAACGGAGGUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB166285.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:2   CUCCCUCCGUUUCUUUUUAUU   22

1.0 Sequence 3949 from Patent EP2559767 NA coding protein psRNATarget
HI405824.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:2   CUCCCUCCGUUUCUUUUUAUU   22

1.0 Sequence 3949 from Patent EP2074227 NA coding protein psRNATarget
JB166291.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:2   CUCCCUCCGUUUCUUUUUAUU   22

1.0 Sequence 3955 from Patent EP2559767 NA coding protein psRNATarget
LQ237954.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:2   CUCCCUCCGUUUCUUUUUAUU   22

1.0 Sequence 3949 from Patent EP2985353 NA coding protein psRNATarget
LQ237960.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:2   CUCCCUCCGUUUCUUUUUAUU   22

1.0 Sequence 3955 from Patent EP2985353 NA coding protein psRNATarget
HI405830.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:2   CUCCCUCCGUUUCUUUUUAUU   22

1.0 Sequence 3955 from Patent EP2074227 NA coding protein psRNATarget
JB170076.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 7740 from Patent EP2559767 NA coding protein psRNATarget
LQ241745.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 7740 from Patent EP2985353 NA coding protein psRNATarget
HI409615.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 7740 from Patent EP2074227 NA coding protein psRNATarget
JB169406.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 7070 from Patent EP2559767 NA coding protein psRNATarget
HI408945.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 7070 from Patent EP2074227 NA coding protein psRNATarget
LQ242091.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 8086 from Patent EP2985353 NA coding protein psRNATarget
HI409961.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 8086 from Patent EP2074227 NA coding protein psRNATarget
HI408618.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 6743 from Patent EP2074227 NA coding protein psRNATarget
JB170160.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 7824 from Patent EP2559767 NA coding protein psRNATarget
JB169789.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 7453 from Patent EP2559767 NA coding protein psRNATarget
JB169079.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 6743 from Patent EP2559767 NA coding protein psRNATarget
LQ241458.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 7453 from Patent EP2985353 NA coding protein psRNATarget
HI408570.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 6695 from Patent EP2074227 NA coding protein psRNATarget
JB169171.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 6835 from Patent EP2559767 NA coding protein psRNATarget
LQ240840.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 6835 from Patent EP2985353 NA coding protein psRNATarget
JB170657.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 8321 from Patent EP2559767 NA coding protein psRNATarget
LQ241829.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 7824 from Patent EP2985353 NA coding protein psRNATarget
JB170077.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 7741 from Patent EP2559767 NA coding protein psRNATarget
HI409699.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 7824 from Patent EP2074227 NA coding protein psRNATarget
LQ240748.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 6743 from Patent EP2985353 NA coding protein psRNATarget
LQ242326.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 8321 from Patent EP2985353 NA coding protein psRNATarget
HI409328.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 7453 from Patent EP2074227 NA coding protein psRNATarget
JB169031.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 6695 from Patent EP2559767 NA coding protein psRNATarget
LQ240700.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 6695 from Patent EP2985353 NA coding protein psRNATarget
HI410196.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 8321 from Patent EP2074227 NA coding protein psRNATarget
JB170422.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 8086 from Patent EP2559767 NA coding protein psRNATarget
HI408710.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 6835 from Patent EP2074227 NA coding protein psRNATarget
HI409616.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 7741 from Patent EP2074227 NA coding protein psRNATarget
LQ241746.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 7741 from Patent EP2985353 NA coding protein psRNATarget
LQ241075.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:6   CUCCCUCCGUUUCUUUUUAUU   26

1.0 Sequence 7070 from Patent EP2985353 NA coding protein psRNATarget
JB163755.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUU   33

1.0 Sequence 1419 from Patent EP2559767 NA coding protein psRNATarget
LQ235424.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUU   33

1.0 Sequence 1419 from Patent EP2985353 NA coding protein psRNATarget
HI403294.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUU   33

1.0 Sequence 1419 from Patent EP2074227 NA coding protein psRNATarget
LQ235486.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUU   33

1.0 Sequence 1481 from Patent EP2985353 NA coding protein psRNATarget
LQ235531.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUU   33

1.0 Sequence 1526 from Patent EP2985353 NA coding protein psRNATarget
LQ235409.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUU   33

1.0 Sequence 1404 from Patent EP2985353 NA coding protein psRNATarget
HI403369.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUU   33

1.0 Sequence 1494 from Patent EP2074227 NA coding protein psRNATarget
HI403356.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUU   33

1.0 Sequence 1481 from Patent EP2074227 NA coding protein psRNATarget
JB163740.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUU   33

1.0 Sequence 1404 from Patent EP2559767 NA coding protein psRNATarget
LQ235499.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUU   33

1.0 Sequence 1494 from Patent EP2985353 NA coding protein psRNATarget
HI403401.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUU   33

1.0 Sequence 1526 from Patent EP2074227 NA coding protein psRNATarget
JB163817.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUU   33

1.0 Sequence 1481 from Patent EP2559767 NA coding protein psRNATarget
JB163862.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUU   33

1.0 Sequence 1526 from Patent EP2559767 NA coding protein psRNATarget
JB163830.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUU   33

1.0 Sequence 1494 from Patent EP2559767 NA coding protein psRNATarget
HI403279.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:13   CUCCCUCCGUUUCUUUUUAUU   33

1.0 Sequence 1404 from Patent EP2074227 NA coding protein psRNATarget
EU964901.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:499   CUCCCUCCGUUUCUUUUUAUU   519

1.0 Zea mays clone 282450 mRNA sequence NA coding protein psRNATarget
XM_008669416.2
ncRNA:21   GAUG---GAGGCAAAGAAAAAUAA   1
  ||||---|||||||||||||||||
targets:488   CUACUCACUCCGUUUCUUUUUAUU   511

3.0 PREDICTED: Zea mays hypothetical protein (LOC100275307), transcript variant X1, mRNA NA coding protein psRNATarget
EU973473.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:651   CUCCCUCCGUUUCUUUUUAUU   671

1.0 Zea mays clone 399411 mRNA sequence NA coding protein psRNATarget
EU974849.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:571   CUCCCUCCGUUUCUUUUUAUU   591

1.0 Zea mays clone 459794 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
NM_001151882.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:571   CUCCCUCCGUUUCUUUUUAUU   591

1.0 Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA NA coding protein psRNATarget
BT060817.2
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:232   CUCCCUCCGUUUCUUUUUAUU   252

1.0 Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds NA coding protein psRNATarget
EZ061772.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:186   CUCCCUCCGUUUCUUUUUAUU   206

1.0 TSA: Zea mays contig62894, mRNA sequence NA coding protein psRNATarget
XM_008671993.2
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:1168   CUCCCUCCGUUUCUUUUUAUU   1188

1.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001156655.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:1290   CUCCCUCCGUUUCUUUUUAUU   1310

1.0 Zea mays wax synthase (LOC100283756), mRNA NA coding protein psRNATarget
EU965844.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:1290   CUCCCUCCGUUUCUUUUUAUU   1310

1.0 Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds NA coding protein psRNATarget
XM_008647346.2
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:143   CUCCCUCCGUUUCUUUUUAUU   163

1.0 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
XM_008651544.2
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:1357   CUUCCUCCGUUUCUUUUUAUU   1377

1.0 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008671992.2
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:1274   CUCCCUCCGUUUCUUUUUAUU   1294

1.0 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008677073.2
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:1529   CUCCCUCCGUUUCUUUUUAUU   1549

1.0 PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA NA coding protein psRNATarget
BT024153.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:192   CUCCCUCCGUUUCUUUUUAUU   212

1.0 Zea mays clone EL01N0438E01 mRNA sequence NA coding protein psRNATarget
NM_001148943.2
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:1545   CUCCCUCCGUUUCUUUUUAUU   1565

1.0 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
XM_008669400.2
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:1602   CUCCCUCCGUUUCUUUUUAUU   1622

1.0 PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008656936.2
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:166   CUCCCUCCGUUUCUUUUUAUU   186

1.0 PREDICTED: Zea mays putative HLH DNA-binding domain superfamily protein (LOC100381500), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020542418.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:1979   CUCCCUCCGUUUCUUUUUAUU   1999

1.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008658752.2
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:2046   CUCCCUCCGUUUCUUUUUAUU   2066

1.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008651543.2
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:2498   CUUCCUCCGUUUCUUUUUAUU   2518

1.0 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020544250.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:2437   CUCCCUCCGUUUCUUUUUAUU   2457

1.0 PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546173.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:1465   CUCCCUCCGUUUCUUUUUAUU   1485

1.0 PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA NA coding protein psRNATarget
XM_020546615.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:2798   CUCCCUCCGUUUCUUUUUAUU   2818

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:2815   CUCCCUCCGUUUCUUUUUAUU   2835

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:2921   CUCCCUCCGUUUCUUUUUAUU   2941

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546613.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||||||||||||||||
targets:3700   CUCCCUCCGUUUCUUUUUAUU   3720

1.0 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
LQ237972.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*=|||||||||||||||||
targets:2   CUCUCUCCGUUUCUUUUUAUU   22

2.0 Sequence 3967 from Patent EP2985353 NA coding protein psRNATarget
HI405842.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*=|||||||||||||||||
targets:2   CUCUCUCCGUUUCUUUUUAUU   22

2.0 Sequence 3967 from Patent EP2074227 NA coding protein psRNATarget
JB166303.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*=|||||||||||||||||
targets:2   CUCUCUCCGUUUCUUUUUAUU   22

2.0 Sequence 3967 from Patent EP2559767 NA coding protein psRNATarget
HI405828.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*=|||||||||||||||||
targets:2   CUCUCUCCGUUUCUUUUUAUU   22

2.0 Sequence 3953 from Patent EP2074227 NA coding protein psRNATarget
LQ237958.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*=|||||||||||||||||
targets:2   CUCUCUCCGUUUCUUUUUAUU   22

2.0 Sequence 3953 from Patent EP2985353 NA coding protein psRNATarget
JB166289.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*=|||||||||||||||||
targets:2   CUCUCUCCGUUUCUUUUUAUU   22

2.0 Sequence 3953 from Patent EP2559767 NA coding protein psRNATarget
HI409094.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||=|||||||||||||
targets:3   CUCCCUCUGUUUCUUUUUAUU   23

2.0 Sequence 7219 from Patent EP2074227 NA coding protein psRNATarget
LQ241224.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||=|||||||||||||
targets:3   CUCCCUCUGUUUCUUUUUAUU   23

2.0 Sequence 7219 from Patent EP2985353 NA coding protein psRNATarget
JB169555.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||=|||||||||||||
targets:3   CUCCCUCUGUUUCUUUUUAUU   23

2.0 Sequence 7219 from Patent EP2559767 NA coding protein psRNATarget
JB169315.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*=|||||||||||||||||
targets:3   CUCUCUCCGUUUCUUUUUAUU   23

2.0 Sequence 6979 from Patent EP2559767 NA coding protein psRNATarget
HI408854.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*=|||||||||||||||||
targets:3   CUCUCUCCGUUUCUUUUUAUU   23

2.0 Sequence 6979 from Patent EP2074227 NA coding protein psRNATarget
LQ240984.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*=|||||||||||||||||
targets:3   CUCUCUCCGUUUCUUUUUAUU   23

2.0 Sequence 6979 from Patent EP2985353 NA coding protein psRNATarget
HI410015.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||=|||||||||||||
targets:6   CUCCCUCUGUUUCUUUUUAUU   26

2.0 Sequence 8140 from Patent EP2074227 NA coding protein psRNATarget
JB170476.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||=|||||||||||||
targets:6   CUCCCUCUGUUUCUUUUUAUU   26

2.0 Sequence 8140 from Patent EP2559767 NA coding protein psRNATarget
LQ242145.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||=|||||||||||||
targets:6   CUCCCUCUGUUUCUUUUUAUU   26

2.0 Sequence 8140 from Patent EP2985353 NA coding protein psRNATarget
LQ237990.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*=|||||||||||||||||
targets:7   CUCUCUCCGUUUCUUUUUAUU   27

2.0 Sequence 3985 from Patent EP2985353 NA coding protein psRNATarget
HI405860.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*=|||||||||||||||||
targets:7   CUCUCUCCGUUUCUUUUUAUU   27

2.0 Sequence 3985 from Patent EP2074227 NA coding protein psRNATarget
JB166321.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*=|||||||||||||||||
targets:7   CUCUCUCCGUUUCUUUUUAUU   27

2.0 Sequence 3985 from Patent EP2559767 NA coding protein psRNATarget
LQ241729.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*=|||||||||||||||||
targets:6   CUCUCUCCGUUUCUUUUUAUU   26

2.0 Sequence 7724 from Patent EP2985353 NA coding protein psRNATarget
JB170060.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*=|||||||||||||||||
targets:6   CUCUCUCCGUUUCUUUUUAUU   26

2.0 Sequence 7724 from Patent EP2559767 NA coding protein psRNATarget
HI409599.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*=|||||||||||||||||
targets:6   CUCUCUCCGUUUCUUUUUAUU   26

2.0 Sequence 7724 from Patent EP2074227 NA coding protein psRNATarget
XM_008664463.2
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||=|||||||||||||
targets:95   CUCCCUCUGUUUCUUUUUAUU   115

2.0 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA NA coding protein psRNATarget
BT065536.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*|||||||||=||||||||
targets:790   CUCCCUCCGUUUUUUUUUAUU   810

2.5 Zea mays full-length cDNA clone ZM_BFb0224G04 mRNA, complete cds NA coding protein psRNATarget
BT070166.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*|||||||||=||||||||
targets:766   CUCCCUCCGUUUUUUUUUAUU   786

2.5 Zea mays full-length cDNA clone ZM_BFc0141C23 mRNA, complete cds NA coding protein psRNATarget
NM_001328133.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*|||||||||=||||||||
targets:766   CUCCCUCCGUUUUUUUUUAUU   786

2.5 Zea mays Methionyl-tRNA synthetase (LOC100384454), mRNA NA coding protein psRNATarget
NM_001156378.2
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*|||||||||=||||||||
targets:848   CUCCCUCCGUUUUUUUUUAUU   868

2.5 Zea mays ribulose-phosphate 3-epimerase (LOC100283478), mRNA NA coding protein psRNATarget
EU964879.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*|||||||||=||||||||
targets:849   CUCCCUCCGUUUUUUUUUAUU   869

2.5 Zea mays clone 282287 ribulose-phosphate 3-epimerase mRNA, complete cds NA coding protein psRNATarget
BT068381.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||=|||||||||||||
targets:1111   CUCCCUCUGUUUCUUUUUAUU   1131

2.0 Zea mays full-length cDNA clone ZM_BFb0135M15 mRNA, complete cds NA coding protein psRNATarget
EU956063.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||=|||||||||||||
targets:1064   CUCCCUCUGUUUCUUUUUAUU   1084

2.0 Zea mays clone 1556707 mRNA sequence NA coding protein psRNATarget
EU973028.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||=|||||||||||||
targets:1170   CUCCCUCUGUUUCUUUUUAUU   1190

2.0 Zea mays clone 391970 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT088158.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||=|||||||||||||
targets:1204   CUCCCUCUGUUUCUUUUUAUU   1224

2.0 Zea mays full-length cDNA clone ZM_BFc0038O11 mRNA, complete cds NA coding protein psRNATarget
XM_008656167.2
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||=|||||||||||||
targets:1223   CUCCCUCUGUUUCUUUUUAUU   1243

2.0 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001138729.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||=|||||||||||||
targets:1404   CUCCCUCUGUUUCUUUUUAUU   1424

2.0 Zea mays uncharacterized LOC100193630 (LOC100193630), mRNA NA coding protein psRNATarget
BT035950.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||=|||||||||||||
targets:1404   CUCCCUCUGUUUCUUUUUAUU   1424

2.0 Zea mays full-length cDNA clone ZM_BFb0089G20 mRNA, complete cds NA coding protein psRNATarget
XM_008656166.2
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||=|||||||||||||
targets:1268   CUCCCUCUGUUUCUUUUUAUU   1288

2.0 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X1, mRNA NA coding protein psRNATarget
EU970288.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*|||=||||||||||||||
targets:1333   CUCCCUUCGUUUCUUUUUAUU   1353

2.0 Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds NA coding protein psRNATarget
BT054612.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*|=||||||||||||||||
targets:1366   CUCCUUCCGUUUCUUUUUAUU   1386

2.0 Zea mays full-length cDNA clone ZM_BFc0190P19 mRNA, complete cds NA coding protein psRNATarget
XM_008675770.2
ncRNA:21   GAUG---GAGGCAAAGAAAAAUAA   1
  =|||---|||||||||||||||||
targets:1807   UUACUCACUCCGUUUCUUUUUAUU   1830

3.0 PREDICTED: Zea mays pectinesterase-like (LOC103650113), mRNA NA coding protein psRNATarget
EU957018.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||=|||||||||||||
targets:2002   CUCCCUCUGUUUCUUUUUAUU   2022

2.0 Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds NA coding protein psRNATarget
XM_008664460.2
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*||||=|||||||||||||
targets:115   CUCCCUCUGUUUCUUUUUAUU   135

2.0 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA NA coding protein psRNATarget
EU943455.1
ncRNA:21   GAUGG--AGGCAAAGAAAAAUAA   1
  *||||--||||||||||||||||
targets:189   GUACCCCUCCGUUUCUUUUUAUU   211

2.5 Zea mays clone 1624294 mRNA sequence NA coding protein psRNATarget
EU975941.1
ncRNA:21   GAUGG--AGGCAAAGAAAAAUAA   1
  *||||--||||||||||||||||
targets:549   GUACCCCUCCGUUUCUUUUUAUU   571

2.5 Zea mays clone 506054 oleosin 16 kDa mRNA, complete cds NA coding protein psRNATarget
EU968632.1
ncRNA:21   GAUGG--AGGCAAAGAAAAAUAA   1
  *||||--||||||||||||||||
targets:558   GUACCCCUCCGUUUCUUUUUAUU   580

2.5 Zea mays clone 322947 oleosin 16 kDa mRNA, complete cds NA coding protein psRNATarget
NM_001349993.1
ncRNA:21   GAUGG--AGGCAAAGAAAAAUAA   1
  *||||--||||||||||||||||
targets:555   GUACCCCUCCGUUUCUUUUUAUU   577

2.5 Zea mays oleosin 16 kDa (oleosin), mRNA NA coding protein psRNATarget
EU952246.1
ncRNA:21   GAUGG--AGGCAAAGAAAAAUAA   1
  *||||--||||||||||||||||
targets:555   GUACCCCUCCGUUUCUUUUUAUU   577

2.5 Zea mays clone 1272655 oleosin 16 kDa mRNA, complete cds NA coding protein psRNATarget
EU976836.1
ncRNA:21   GAUGG--AGGCAAAGAAAAAUAA   1
  *||||--||||||||||||||||
targets:554   GUACCCCUCCGUUUCUUUUUAUU   576

2.5 Zea mays clone 991472 oleosin 16 kDa mRNA, complete cds NA coding protein psRNATarget
EU952863.1
ncRNA:21   GAUGG--AGGCAAAGAAAAAUAA   1
  *||||--||||||||||||||||
targets:556   GUACCCCUCCGUUUCUUUUUAUU   578

2.5 Zea mays clone 1291487 oleosin 16 kDa mRNA, complete cds NA coding protein psRNATarget
EU941893.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  =||||||=|||||*|||||||
targets:87   UUACCUCUGUUUCAUUUUAUU   107

2.5 Zea mays clone 1471538 mRNA sequence NA coding protein psRNATarget
EU942074.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  =||||||=|||||*|||||||
targets:87   UUACCUCUGUUUCAUUUUAUU   107

2.5 Zea mays clone 1475451 mRNA sequence NA coding protein psRNATarget
XM_008675451.2
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  =||||||=|||||*|||||||
targets:705   UUACCUCUGUUUCAUUUUAUU   725

2.5 PREDICTED: Zea mays histone H4 (LOC103649716), mRNA NA coding protein psRNATarget
BT017382.1
ncRNA:21   GAUGGAGGCAAAGAAAAAUAA   1
  ||*|||||||||||*||||||
targets:697   CUCCCUCCGUUUCUCUUUAUU   717

2.5 Zea mays clone EL01N0326E08.c mRNA sequence NA coding protein psRNATarget
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