ncRNA ID | novel_zma_miR3860 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:113948880-113949051 [-] |
Reference genome | RefGen_v4 |
Source | SRR2287159;SRR2287163;SRR3341856;SRR5099742;SRR5100248;SRR5100255;SRR5105961;SRR5105963 |
Length | 23 |
Mature sequence(if miRNA) | 1 - CAUGCUAACACUGAACAUUUUAG - 23 |
Stem-loop(if miRNA) |
--AGGAA       -UC      ----U   -UUCU UG   -      ---------CUC   ---- AUCUACACCAUCAAAUUUCGACUGUGA        GUUCAGU   AGUAUG     CAU     U  GAU AUCAGG            GAU    G                           C        |||||||   ||||||     |||     |  ||| ||||||            |||    |        CAAGUCA   UCGUAC     GUA     A  CUA UAGUCU            GGU    G                           U GAUUUUA       CAA      UUAUU   UUCCU GU   G      UGUAAGUCAAAA   UUUA AGUCACUUUAUCAAGAGUGUAUUCGUA |
Stem-loop sequence | AGGAAGUUCAGUUCAGUAUGUCAUUUCUUUGGAUAUCAGGCUCGAUGAUCUACACCAUCAAAUUUCGACUGUGACUAUGCUUAUGUGAGAACUAUUUCACUGAGAUUUUGGAAAACUGAAUGUUCUGAUGAUCUGAUCCUUAUGUUAUUCAUGCUAACACUGAACAUUUUAG |