| ncRNA ID | osa-miR444a-5p |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | NA |
| Reference genome | NA |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | NA - GCUAGAGGUGGCAACUGCAUA - NA |
| Stem-loop(if miRNA) |
AU U A UG - UG -C A GCAAU GGGGGCAGCAAGCU GAGG GCAACUGCAUAAUUUGCAAGAA AU UUGG UG A ||||| |||||||||||||| |||| |||||||||||||||||||||| || |||| || G CGUUG CCUCCGUCGUUCGA CUCC CGUUGACGUAUUGAACGUUCUU UA AGCC AC A AC U A GU A GU AU U |
| Stem-loop sequence | AUGCAAUUGGGGGCAGCAAGCUAGAGGUGGCAACUGCAUAAUUUGCAAGAAAUUGUUGGCUGAAGAUCAUACCGAUGAUAUUCUUGCAAGUUAUGCAGUUGCUGCCUCAAGCUUGCUGCCUCCUGUUGCCA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_015775386.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase 83A1 (LOC4334161), mRNA | UDP-glycosyltransferase 83A1(LOC4334161) | coding protein | psRNATarget | |||||||||
| XM_015769710.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group disease resistance protein RPP13 (LOC4328990), transcript variant X2, mRNA | disease resistance protein RPP13(LOC4328990) | coding protein | psRNATarget | |||||||||
| XM_015769709.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group disease resistance protein RPP13 (LOC4328990), transcript variant X1, mRNA | disease resistance protein RPP13(LOC4328990) | coding protein | psRNATarget |
| 1 | PMID:15805478
"Cloning and characterization of microRNAs from rice"; Sunkar R, Girke T, Jain PK, Zhu JK; Plant Cell. 17:1397-1411(2005). |
| 2 | PMID:18353984
"Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs)"; Lu C, Jeong DH, Kulkarni K, Pillay M, Nobuta K, German R, Thatcher SR, Maher C, Zhang L, Ware D, Liu B, Cao X, Meyers BC, Green PJ; Proc Natl Acad Sci U S A. 105:4951-4956(2008). |
| 3 | PMID:21791435
"Differential expression of the microRNAs in superior and inferior spikelets in rice (Oryza sativa)"; Peng T, Lv Q, Zhang J, Li J, Du Y, Zhao Q; J Exp Bot. 62:4943-4954(2011). |