Search result

BaseInfo

ncRNA ID novel_zma_miR3859
Species Zea mays
Class miRNA
Genome position Chr6:148506387-148506554 [-]
Reference genome RefGen_v4
Source SRR2287159
Length 24
Mature sequence(if miRNA) 1 - GCAGGAUCGACGUUGAUGGCGGCU - 24
Stem-loop(if miRNA) --           AC      C U   --    AGG G     G       -   UGA GG   GGA    ---AG  CGAGGAGCGU
  CCGCCAUCAAC  CGAUCC G CGA  UGGA   U AGCGG GCGGCCG CGU   U  CGG   GCAG     AU          U
  |||||||||||  |||||| | |||  ||||   | ||||| ||||||| |||   |  |||   ||||     ||
  GGCGGUAGUUG  GCUAGG C GCU  GCCU   G UCGUC CGCCGGC GCG   G  GCU   CGUU     CG          G
UC           CA      A -   UA    CGG G     G       U   -UG GA   AGG    AGAUG  AGGGGCGGUA
Stem-loop sequence CCGCCAUCAACACCGAUCCCGUCGAUGGAAGGUGAGCGGGGCGGCCGCGUUGAUGGCGGGGAGCAGAGAUCGAGGAGCGUUGAUGGCGGGGAGCGUAGAUUGCGGAUCGAGGGUGCGUCGGCCGCGCUGCUGGGGCUCCGAUUCGCAGGAUCGACGUUGAUGGCGGCU