Search result

BaseInfo

ncRNA ID novel_zma_miR3855
Species Zea mays
Class miRNA
Genome position Chr5:157968943-157968998 [+]
Reference genome RefGen_v4
Source SRR2287159;SRR5451005;SRR2089704
Length 24
Mature sequence(if miRNA) 33 - GAGCCCGUUGGGCUGGCCCGGGCA - 56
Stem-loop(if miRNA) --     -A    G GC         CA
  CCCGG  UAGC U  CGGGCUCGA  G
  |||||  |||| |  |||||||||  C
  GGGCC  GUCG G  GCCCGAGUU  C
AC     CG    G UU         UA
Stem-loop sequence CCCGGAUAGCGUGCCGGGCUCGACAGCCAUUUGAGCCCGUUGGGCUGGCCCGGGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU948698.1
ncRNA:24   ACGGGCCCGGUCGGGUUGCCCGAG   1
  |||=||||||||||||||||||**
targets:670   UGCUCGGGCCAGCCCAACGGGCCG   693

2.5 Zea mays clone 382199 mRNA sequence NA coding protein psRNATarget