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BaseInfo

ncRNA ID	novel_zma_miR3846
Species	Zea mays
Class	miRNA
Genome position	Chr5:26242693-26242787 [-]
Reference genome	RefGen_v4
Source	SRR2287159;SRR2089700
Length	24
Mature sequence(if miRNA)	72 - AGGGGCGGACUGUCCGCGGCCUGA - 95
Stem-loop(if miRNA)	--    -           GC    - G    C   -C     GC   C  G   AGGG GCGGACUGUCC  GGCC U AGGC GGA  GGUCC  GGC UG U   |||| |||||||||||  |||| | |||| |||  |||||  ||| || G   UCCC CGCCUGGCAGG  CCGG A UCCG UCU  UCGGG  UCG AC C GG    G           --    C G    -   CU     -A   -  G
Stem-loop sequence	AGGGGCGGACUGUCCGCGGCCUGAGGCCGGACGGUCCGCGGCCUGGUGCGCAGCUAGGGCUUCUCUGCCUGACGGCCGGACGGUCCGCGCCCUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001196968.1	ncRNA:24   AGUCCGGCGCCUGUCAGGCGGGGA   1   |||||||||||||||||||||||| targets:1265   UCAGGCCGCGGACAGUCCGCCCCU   1288 Target Full Sequence	0.0	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
BT088349.1	ncRNA:24   AGUCCGGCGCCUGUCAGGCGGGGA   1   |||||||||||||||||||||||| targets:1265   UCAGGCCGCGGACAGUCCGCCCCU   1288 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020539115.1	ncRNA:24   AGUCCGGCGCCUGUCAGGCGGGGA   1   *||||||||||||||||||||||| targets:2708   CCAGGCCGCGGACAGUCCGCCCCU   2731 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA	NA	coding protein	psRNATarget