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BaseInfo

ncRNA ID	novel_zma_miR3841
Species	Zea mays
Class	miRNA
Genome position	Chr1:249684766-249684852 [+]
Reference genome	RefGen_v4
Source	SRR1583944;SRR2647221;SRR2647386;SRR2647388;SRR2647389;SRR2647390;SRR2647391
Length	24
Mature sequence(if miRNA)	64 - UCCCCUCUAAUCCACUUCUGGAUU - 87
Stem-loop(if miRNA)	--        AU                 -A        U   U   UCCAGAAG  GAUUGGAGGGGAUUAAA  CCCUCCUA UCA U   ||||||||  |||||||||||||||||  |||||||| |||   AGGUCUUC  CUAAUCUCCCCUAAUUU  GGGAGGAU AGU U UU        AC                 AG        U   U
Stem-loop sequence	UCCAGAAGAUGAUUGGAGGGGAUUAAAACCCUCCUAUUCAUUUUUGAUUAGGAGGGGAUUUAAUCCCCUCUAAUCCACUUCUGGAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT041883.1	ncRNA:24   UUAGGUCUUCACCUAAUCUCCCCU   1   |||=||||||*|||||=||||||| targets:804   AAUUCAGAAGCGGAUUGGAGGGGA   827 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0073E14 mRNA, complete cds	NA	coding protein	psRNATarget
BT062257.1	ncRNA:24   UUAGGUCUUCACCUAAUCUCCCCU   1   |||=||||||*|||||=||||||| targets:1103   AAUUCAGAAGCGGAUUGGAGGGGA   1126 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0234J14 mRNA, complete cds	NA	coding protein	psRNATarget
EU975659.1	ncRNA:24   UUAGGUCUUCACCUAAUCUCCCCU   1   |||=||||||*|||||=||||||| targets:2132   AAUUCAGAAGCGGAUUGGAGGGGA   2155 Target Full Sequence	2.5	Zea mays clone 495563 ankyrin protein kinase-like mRNA, complete cds	NA	coding protein	psRNATarget
NM_001158998.2	ncRNA:24   UUAGGUCUUCACCUAAUCUCCCCU   1   |||=||||||*|||||=||||||| targets:2133   AAUUCAGAAGCGGAUUGGAGGGGA   2156 Target Full Sequence	2.5	Zea mays Ankyrin protein kinase-like (LOC100279910), mRNA	NA	coding protein	psRNATarget