ncRNA ID | osa-miR3980b-5p |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - AAUCGACGGCCUCAGUCAGGG - NA |
Stem-loop(if miRNA) |
                 UUCA  -                    A      ----------G        CC  UGAGCUCGGGAGACGCGUUCUGCUUUGGC GCGGCGUCUUCCUCUUC    CC UUAGGAGAAUCGACGGCCUC GUCAGG           GCGCCUUC  CU                             U |||||||||||||||||    || |||||||||||||||||||| ||||||           ||||||||  || CGCCGCAGAAGGAGAAG    GG GAUCCUCUUAGCUGCCGGAG CGGUCC           CUGAGGCC  CU                             G                  ----  C                    C      UGCUUCACAGA        -A  ACUACUCCCGGGCGGCCUCGGACGCGGGG |
Stem-loop sequence | GCGGCGUCUUCCUCUUCUUCACCUUAGGAGAAUCGACGGCCUCAGUCAGGGGCGCCUUCCCCUUGAGCUCGGGAGACGCGUUCUGCUUUGGCUGGGGGCGCAGGCUCCGGCGGGCCCUCAUCAUCACCGGAGUCAGACACUUCGUCCUGGCCGAGGCCGUCGAUUCUCCUAGCGGGAAGAGGAAGACGCCGC |
1 | PMID:21113019
"Identification and analysis of seven H(2)O(2)-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica)"; Li T, Li H, Zhang YX, Liu JY; Nucleic Acids Res. 39:2821-2833(2011). |