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BaseInfo

ncRNA ID osa-miR3980b-5p
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - AAUCGACGGCCUCAGUCAGGG - NA
Stem-loop(if miRNA)                  UUCA  -                    A      ----------G        CC  UGAGCUCGGGAGACGCGUUCUGCUUUGGC
GCGGCGUCUUCCUCUUC    CC UUAGGAGAAUCGACGGCCUC GUCAGG           GCGCCUUC  CU                             U
|||||||||||||||||    || |||||||||||||||||||| ||||||           ||||||||  ||
CGCCGCAGAAGGAGAAG    GG GAUCCUCUUAGCUGCCGGAG CGGUCC           CUGAGGCC  CU                             G
                 ----  C                    C      UGCUUCACAGA        -A  ACUACUCCCGGGCGGCCUCGGACGCGGGG
Stem-loop sequence GCGGCGUCUUCCUCUUCUUCACCUUAGGAGAAUCGACGGCCUCAGUCAGGGGCGCCUUCCCCUUGAGCUCGGGAGACGCGUUCUGCUUUGGCUGGGGGCGCAGGCUCCGGCGGGCCCUCAUCAUCACCGGAGUCAGACACUUCGUCCUGGCCGAGGCCGUCGAUUCUCCUAGCGGGAAGAGGAAGACGCCGC

Reference

1 PMID:21113019
"Identification and analysis of seven H(2)O(2)-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica)";
Li T, Li H, Zhang YX, Liu JY;
Nucleic Acids Res. 39:2821-2833(2011).