ncRNA ID | novel_zma_miR3826 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:142359335-142359409 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287159 |
Length | 24 |
Mature sequence(if miRNA) | 52 - AGGGGCGGACUGUCCGCGGCCUGA - 75 |
Stem-loop(if miRNA) |
-G     --           GG    -   C   - CG G   GGGCC  GGACGGUCCGC  CCUG GUG GAG G  C G   |||||  |||||||||||  |||| ||| ||| |  |   UCCGG  CCUGUCAGGCG  GGAC CAU CUC C  G U AG     CG           -G    G   -   U AU G |
Stem-loop sequence | GGGGCCGGACGGUCCGCGGCCUGGUGCGAGGCGCGGUGGUACUCUCUACGCAGGGGCGGACUGUCCGCGGCCUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001196968.1 |
|
0.0 | Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA | NA | coding protein | psRNATarget | |||||||||
BT088349.1 |
|
0.0 | Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
XM_020539115.1 |
|
0.0 | PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA | NA | coding protein | psRNATarget |