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BaseInfo

ncRNA ID novel_zma_miR3824
Species Zea mays
Class miRNA
Genome position Chr4:11121615-11121782 [+]
Reference genome RefGen_v4
Source SRR2287159
Length 24
Mature sequence(if miRNA) 1 - UUAAGGAACUGCAAGUGGAAAUAU - 24
Stem-loop(if miRNA) --           CA          U   UU                                     AA  UAUUU        G
  UUAAGGAACUG  AGUGGAAAUA AUU  CAUUGGCGGUUCUCUUUACACAAUCGCUAGUGAAAAU  AG     UUAUUGGU G
  |||||||||||  |||||||||| |||  |||||||||||||||||||||||||||||||||||||  ||     |||||||| U
  AAUUCUUUGGC  UCACCUUUGU UAA  GUGAUCGUCAAGAGAAGUGUGUUGGCGGUCACUUUUA  UC     AAUAGCCA U
CG           AG          U   GG                                     -A  ----U        G
Stem-loop sequence UUAAGGAACUGCAAGUGGAAAUAUAUUUUCAUUGGCGGUUCUCUUUACACAAUCGCUAGUGAAAAUAAAGUAUUUUUAUUGGUGGUUGACCGAUAAUCUAAUUUUCACUGGCGGUUGUGUGAAGAGAACUGCUAGUGGGAAUUUGUUUCCACUGACGGUUUCUUAAGC