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BaseInfo

ncRNA ID	novel_zma_miR3819
Species	Zea mays
Class	miRNA
Genome position	Chr4:44234314-44234374 [+]
Reference genome	RefGen_v4
Source	SRR2287159;SRR2287160;SRR2287161
Length	24
Mature sequence(if miRNA)	1 - GCACUCGGUAAAGAAGGCUCGGCA - 24
Stem-loop(if miRNA)	--GC                 CG  AAACA     ACUCGGUAAAGAAGGCU  GC     G     |||||||||||||||||  ||     U     UGAGCCGUUUCUUCCGA  CG     G UUCA                 AA  GCUAC
Stem-loop sequence	GCACUCGGUAAAGAAGGCUCGGCAAACAGUGCAUCGGCAAAGCCUUCUUUGCCGAGUACUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008680068.2	ncRNA:24   ACGGCUCGGAAGAAAUGGCUCACG   1   ||=||||||||||||=|||||||= targets:189   UGUCGAGCCUUCUUUGCCGAGUGU   212 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103653106 (LOC103653106), mRNA	NA	coding protein	psRNATarget
XM_008654495.2	ncRNA:24   ACGGCUCGGAAGAAAUGGCUCACG   1   *||**||||||||||=|||||||| targets:7   GGCAAAGCCUUCUUUGCCGAGUGC   30 Target Full Sequence	1.5	PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA	NA	coding protein	psRNATarget
JB167423.1	ncRNA:24   ACGGCUCGGAAGAAAUGGCUCACG   1   ****|||*|||||||=|||||||| targets:10   CAAAGAGGCUUCUUUGCCGAGUGC   33 Target Full Sequence	2.5	Sequence 5087 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239092.1	ncRNA:24   ACGGCUCGGAAGAAAUGGCUCACG   1   ****|||*|||||||=|||||||| targets:10   CAAAGAGGCUUCUUUGCCGAGUGC   33 Target Full Sequence	2.5	Sequence 5087 from Patent EP2985353	NA	coding protein	psRNATarget
HI406962.1	ncRNA:24   ACGGCUCGGAAGAAAUGGCUCACG   1   ****|||*|||||||=|||||||| targets:10   CAAAGAGGCUUCUUUGCCGAGUGC   33 Target Full Sequence	2.5	Sequence 5087 from Patent EP2074227	NA	coding protein	psRNATarget
EU962802.1	ncRNA:24   ACGGCUCGGAAGAAAUGGCUCACG   1   ****|||*|||||||=|||||||| targets:1093   CAAAGAGGCUUCUUUGCCGAGUGC   1116 Target Full Sequence	2.5	Zea mays clone 245661 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget