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BaseInfo

ncRNA ID	novel_zma_miR3811
Species	Zea mays
Class	miRNA
Genome position	Chr1:216819215-216819338 [+]
Reference genome	RefGen_v4
Source	SRR1583944
Length	23
Mature sequence(if miRNA)	1 - AGGAUCGUUGUCGUCAUAUGAUA - 23
Stem-loop(if miRNA)	--       -U G    -        AUAUUUUAUUUAGCU    --U        -CUUCUA      AA   AGGAUCG  U UCGU CAUAUGAU               AUUC   GUACAGAA       UCAUAU  U   |||||||  | |||| ||||||||               ||||   ||||||||       ||||||  A   UCCUAGU  A AGUA GUAUACUA               UGAG   CAUGUCUU       AGUGUA  A GA       UC G    C        --------------C    UAC        UAUUUAC      CA
Stem-loop sequence	AGGAUCGUUGUCGUCAUAUGAUAUAUUUUAUUUAGCUAUUCUGUACAGAACUUCUAUCAUAUAAUAAACAUGUGACAUUUAUUUCUGUACCAUGAGUCAUCAUAUGCAUGAGACUUGAUCCUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008680517.2	ncRNA:23   AU--AGUAUACUGCUGUUGCUAGGA   1   ||--||||||||||||||||||||| targets:8107   UACUUCAUAUGACGACAACGAUCCU   8131 Target Full Sequence	0.0	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g65560 (LOC103653689), mRNA	NA	coding protein	psRNATarget
EZ082629.1	ncRNA:23   AUAGUAUACUGCUGUUGCUAGGA   1   *||||*||||||||||||||||* targets:60   CAUCACAUGACGACAACGAUCCC   82 Target Full Sequence	2.0	TSA: Zea mays contig18272, mRNA sequence	NA	coding protein	psRNATarget
EU940976.1	ncRNA:23   AUAGUAUACUGCUGUUGCUAGGA   1   *|||||||||*|||||||||||* targets:26   CAUCAUAUGAAGACAACGAUCCA   48 Target Full Sequence	2.5	Zea mays clone 1226050 mRNA sequence	NA	coding protein	psRNATarget