ncRNA ID | osa-miR3980a-5p |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - AAUCGACGGCCUCAGUCAGGG - NA |
Stem-loop(if miRNA) |
               UCU    C                    A      -----G    ----  UCCCCUUGAGCUCGGGAGACGCAUUCUGCUUUGGC GCGGCGUCUUCCUCU   UCCC UUAGGAGAAUCGACGGCCUC GUCAGG      GCGC    CU                                   U |||||||||||||||   |||| |||||||||||||||||||| ||||||      ||||    || CGCCGCAGAAGGAGA   AGGG GAUCCUCUUAGCUGCCGGAG CGGUCC      ACAG    AG                                   G                ---    C                    C      UGCUUC    AUUA  GCCACUGCUGUUCCCGGGCGGCCUCGGACGCGGGG |
Stem-loop sequence | GCGGCGUCUUCCUCUUCUUCCCCUUAGGAGAAUCGACGGCCUCAGUCAGGGGCGCCUUCCCCUUGAGCUCGGGAGACGCAUUCUGCUUUGGCUGGGGGCGCAGGCUCCGGCGGGCCCUUGUCGUCACCGGAAUUAGACACUUCGUCCUGGCCGAGGCCGUCGAUUCUCCUAGCGGGAAGAGGAAGACGCCGC |
1 | PMID:21113019
"Identification and analysis of seven H(2)O(2)-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica)"; Li T, Li H, Zhang YX, Liu JY; Nucleic Acids Res. 39:2821-2833(2011). |