ncRNA ID | novel_zma_miR3809 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:30060269-30060372 [+] |
Reference genome | RefGen_v4 |
Source | SRR2287159 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AGGGGAUGGGGAAGUUUCUUC - 21 |
Stem-loop(if miRNA) |
--A            -GU      --------      GGGG  G  AA       AA    GGGGAUGGGGAA   UUCUUC        CCCCAU    AU UA  CGGGGAA  A    ||||||||||||   ||||||        ||||||    || ||  |||||||    UCCCUACCCCUU   AAGAGG        GGGGUA    UG GU  GCCCCUU  U UUG            AUG      UAGGGGCA      --AA  G  -A       AU |
Stem-loop sequence | AGGGGAUGGGGAAGUUUCUUCCCCCAUGGGGAUGUAAACGGGGAAAAAUUAUUCCCCGAUGGGUAAAUGGGGACGGGGAUGGAGAAGUAUUCCCCAUCCCUGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020542351.1 |
|
2.0 | PREDICTED: Zea mays uncharacterized LOC103634680 (LOC103634680), transcript variant X5, mRNA | NA | coding protein | psRNATarget |