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BaseInfo

ncRNA ID novel_zma_miR3807
Species Zea mays
Class miRNA
Genome position Chr4:28579863-28579952 [+]
Reference genome RefGen_v4
Source SRR2287159
Length 24
Mature sequence(if miRNA) 67 - AGUGCUAUGGCCCUGACACUCGAC - 90
Stem-loop(if miRNA) --               CAA         A      UU    AGU
  CGAGUGUCGGGGCCA   CACUCGGCA AGAAGC  UACC   G
  |||||||||||||||   ||||||||| ||||||  ||||
  GCUCACAGUCCCGGU   GUGAGCUGU UCUUCG  GUGG   C
CA               AUC         C      UU    ACC
Stem-loop sequence CGAGUGUCGGGGCCACAACACUCGGCAAAGAAGCUUUACCAGUGCCCAGGUGUUGCUUCUCUGUCGAGUGCUAUGGCCCUGACACUCGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI406144.1
ncRNA:22   GCUCACAGUCCCGGUAUCGUGA   1
  *||||||||*||||||||||||
targets:1   GGAGUGUCAAGGCCAUAGCACU   22

1.5 Sequence 4269 from Patent EP2074227 NA coding protein psRNATarget
JB166605.1
ncRNA:22   GCUCACAGUCCCGGUAUCGUGA   1
  *||||||||*||||||||||||
targets:1   GGAGUGUCAAGGCCAUAGCACU   22

1.5 Sequence 4269 from Patent EP2559767 NA coding protein psRNATarget
LQ238274.1
ncRNA:22   GCUCACAGUCCCGGUAUCGUGA   1
  *||||||||*||||||||||||
targets:1   GGAGUGUCAAGGCCAUAGCACU   22

1.5 Sequence 4269 from Patent EP2985353 NA coding protein psRNATarget